BLASTX nr result

ID: Cimicifuga21_contig00035122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035122
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273307.2| PREDICTED: uncharacterized protein LOC100266...    93   3e-17
ref|XP_002528807.1| kinesin, putative [Ricinus communis] gi|2235...    87   1e-15
ref|XP_003596937.1| Kinesin-like protein [Medicago truncatula] g...    83   3e-14
ref|XP_003543396.1| PREDICTED: uncharacterized protein LOC100814...    82   4e-14
ref|XP_002313626.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13

>ref|XP_002273307.2| PREDICTED: uncharacterized protein LOC100266768 [Vitis vinifera]
          Length = 1361

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 66/141 (46%), Positives = 74/141 (52%), Gaps = 39/141 (27%)
 Frame = +1

Query: 1    RVRLKASIEDNKKLIELYEVAAAEV----SKAREN--------QTNDGL----------- 111
            R++LK  IEDN KLIELYE A AE     S+  EN          NDG            
Sbjct: 778  RMKLKVLIEDNNKLIELYERAVAETNHKDSEEAENAQEDNAGVHKNDGFPELTAEKAMDM 837

Query: 112  ------LSEQLQDLHEENEKLMGLYEKAMQERDEYKRRIFQ--------EEFNCPEKLVE 249
                  L  QL D+HEENEKLMGLYEKAMQERDE+KR +             NC EKLVE
Sbjct: 838  KRVVENLEHQLMDMHEENEKLMGLYEKAMQERDEFKRMLSSGGKNSNETTRENCVEKLVE 897

Query: 250  VDGGEVLK--SGDAKLSEEAS 306
            VDG E +K  SG+  L  E S
Sbjct: 898  VDGTESIKSISGEEMLLVEES 918


>ref|XP_002528807.1| kinesin, putative [Ricinus communis] gi|223531760|gb|EEF33580.1|
            kinesin, putative [Ricinus communis]
          Length = 1381

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 64/180 (35%), Positives = 81/180 (45%), Gaps = 67/180 (37%)
 Frame = +1

Query: 1    RVRLKASIEDNKKLIELYEVAAAE-----VSKARENQTND-------------------- 105
            + +LKA IE+   LIE+YE AA+E     ++KA   + ND                    
Sbjct: 798  QTKLKALIEEKNSLIEMYERAASESNYKTLNKAESTEENDMEIDKQKDIEVDSNGGPIEF 857

Query: 106  ------------GLLSEQLQDLHEENEKLMGLYEKAMQERDEYKRRIF--------QEEF 225
                          L  QL ++HEEN+KLMGLYEKAM ERDE+KR +F          E 
Sbjct: 858  AKVKESDMETVVKNLEHQLMEMHEENDKLMGLYEKAMHERDEFKRMLFSSSQNRVKSREL 917

Query: 226  NCPEKLVEVDGGEV----------------------LKSGDAKLSEEASFTSSMDLEESG 339
            +CPEKLVEVDGGE                        KSG+A L  EA   +S D   +G
Sbjct: 918  DCPEKLVEVDGGEYNVSCSLPSDLEANKLENSVLASAKSGEAVLHTEAVLFASSDARLNG 977


>ref|XP_003596937.1| Kinesin-like protein [Medicago truncatula]
            gi|355485985|gb|AES67188.1| Kinesin-like protein
            [Medicago truncatula]
          Length = 1364

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 35/136 (25%)
 Frame = +1

Query: 1    RVRLKASIEDNKKLIELYEVAAAE----VSKARENQTNDGL------------------- 111
            RV+L+A +EDN KLIELYE A AE    ++K   +Q  +                     
Sbjct: 806  RVKLRALLEDNSKLIELYEQATAESNRNITKGENSQEIESKVENSYLLEKREEEATLKRV 865

Query: 112  ---LSEQLQDLHEENEKLMGLYEKAMQERDEYKRRI---------FQEEFNCPEKLVEVD 255
               L  QL +++EENEKLM LYE+AMQE+D+ KR +          + EF+C EKLVEVD
Sbjct: 866  VEDLQHQLMEINEENEKLMSLYERAMQEKDDLKRTLSCYEHGRVETKGEFDCMEKLVEVD 925

Query: 256  GGEVLKSGDAKLSEEA 303
            GGE   S    +SEEA
Sbjct: 926  GGE-RDSVVGTVSEEA 940


>ref|XP_003543396.1| PREDICTED: uncharacterized protein LOC100814373 [Glycine max]
          Length = 1342

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 52/125 (41%), Positives = 69/125 (55%), Gaps = 37/125 (29%)
 Frame = +1

Query: 1    RVRLKASIEDNKKLIELYEVAAAEVSKAREN----------QTNDGL------------- 111
            +++LKA IEDN KLIELYE AAAE +    N          + ++G              
Sbjct: 781  KMKLKALIEDNSKLIELYEQAAAEKNNRNVNKGEGAQEIGSEIDNGCYSLETTKEETELK 840

Query: 112  -----LSEQLQDLHEENEKLMGLYEKAMQERDEYKRRI---------FQEEFNCPEKLVE 249
                 L  QL +++EENEKL+ LYE+AMQE+DE KR +          + + +CPEKLVE
Sbjct: 841  GVVENLQHQLMEMNEENEKLLSLYERAMQEKDEIKRTLACFGHERVETKGDMDCPEKLVE 900

Query: 250  VDGGE 264
            VDGGE
Sbjct: 901  VDGGE 905


>ref|XP_002313626.1| predicted protein [Populus trichocarpa] gi|222850034|gb|EEE87581.1|
            predicted protein [Populus trichocarpa]
          Length = 1235

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/114 (46%), Positives = 63/114 (55%), Gaps = 24/114 (21%)
 Frame = +1

Query: 7    RLKASIEDNKKLIELYEVAAAEVSKARENQTNDGL---------------LSEQLQDLHE 141
            +LKA IE+   LIE+YE AA   SK+  N  ND                 L +Q  +LHE
Sbjct: 786  KLKALIEEKNSLIEMYERAA---SKSSYNNVNDSESEQNGMELEMKTVENLEQQRMELHE 842

Query: 142  ENEKLMGLYEKAMQERDEYKRRIFQEEFN---------CPEKLVEVDGGEVLKS 276
            ENEKLMGLYE AM ERDE +RR+   E N         CPEK VEVDG + L+S
Sbjct: 843  ENEKLMGLYEIAMHERDELRRRLSSYEQNRVESRGELHCPEKHVEVDGEKCLQS 896


Top