BLASTX nr result

ID: Cimicifuga21_contig00035102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035102
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525845.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002331998.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_002525845.1| conserved hypothetical protein [Ricinus communis]
           gi|223534850|gb|EEF36539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/107 (39%), Positives = 71/107 (66%)
 Frame = +3

Query: 3   WDEFVEDLCLRFEDLSLGNYVGNFNKLVQTATVEEYFEQFEDLKSLMVSKNNQLNDEYFV 182
           W+ F ++LC RF  + + + V   N++ Q  +V  Y E+FE+L+SLM+  N   ++ YF+
Sbjct: 122 WEVFAKELCRRFGKVIVSDIVEESNRIQQVGSVINYQERFEELRSLMLKYNPMPDESYFM 181

Query: 183 LSFLSGLKEEIKASVQMFQPTNLNQAFHLARMQETALDAQQKRHKFL 323
            SF+SGL EEI++ V++ +   L+QA+  A++ E +++A  KRHKFL
Sbjct: 182 SSFVSGLNEEIRSMVKLLKLATLSQAYERAKLYEKSIEAMFKRHKFL 228


>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/107 (42%), Positives = 69/107 (64%)
 Frame = +3

Query: 3   WDEFVEDLCLRFEDLSLGNYVGNFNKLVQTATVEEYFEQFEDLKSLMVSKNNQLNDEYFV 182
           W+EF +DLC RF   S  + V  FNKL+Q   +++Y E+FE+L+SLM   N  L + Y+V
Sbjct: 78  WEEFSQDLCRRFG--SKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYYV 135

Query: 183 LSFLSGLKEEIKASVQMFQPTNLNQAFHLARMQETALDAQQKRHKFL 323
            SF+SGLK+EIK  +++ +P  +  AF  A+ QE A +A  K+ + L
Sbjct: 136 SSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSL 182


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/107 (42%), Positives = 69/107 (64%)
 Frame = +3

Query: 3   WDEFVEDLCLRFEDLSLGNYVGNFNKLVQTATVEEYFEQFEDLKSLMVSKNNQLNDEYFV 182
           W+EF +DLC RF   S  + V  FNKL+Q   +++Y E+FE+L+SLM   N  L + Y+V
Sbjct: 78  WEEFSQDLCRRFG--SKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYYV 135

Query: 183 LSFLSGLKEEIKASVQMFQPTNLNQAFHLARMQETALDAQQKRHKFL 323
            SF+SGLK+EIK  +++ +P  +  AF  A+ QE A +A  K+ + L
Sbjct: 136 SSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSL 182


>ref|XP_002331998.1| predicted protein [Populus trichocarpa] gi|222874766|gb|EEF11897.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/107 (40%), Positives = 69/107 (64%)
 Frame = +3

Query: 3   WDEFVEDLCLRFEDLSLGNYVGNFNKLVQTATVEEYFEQFEDLKSLMVSKNNQLNDEYFV 182
           W+EF   +C RF + +  + V  FNKL     +EEY E+FE+LKSLM S N+ L + Y++
Sbjct: 162 WEEFSRAICSRFGNRA--DIVEEFNKLTHEGGIEEYVERFEELKSLMHSLNSLLLESYYI 219

Query: 183 LSFLSGLKEEIKASVQMFQPTNLNQAFHLARMQETALDAQQKRHKFL 323
            SF+SGLKE+IK  +++ +P  L + F  A+ QE + +   +++KF+
Sbjct: 220 SSFISGLKEDIKPMLKILKPETLMKNFDQAKWQEESNNVLARKNKFM 266


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/107 (41%), Positives = 69/107 (64%)
 Frame = +3

Query: 3   WDEFVEDLCLRFEDLSLGNYVGNFNKLVQTATVEEYFEQFEDLKSLMVSKNNQLNDEYFV 182
           W++F   +C RF + +    V  FNKL+Q   V+EY E+FE+LKSLM S N+ L + Y++
Sbjct: 115 WEKFSGAICNRFGNRTA--IVEEFNKLMQEGDVDEYVERFEELKSLMHSLNSLLPESYYI 172

Query: 183 LSFLSGLKEEIKASVQMFQPTNLNQAFHLARMQETALDAQQKRHKFL 323
            SF+SGLKE+IK  +++ +P  L  AF  A+ QE + +   + +KF+
Sbjct: 173 SSFISGLKEDIKPMLKILKPVTLMIAFDQAKWQEESNNVLARNNKFM 219


Top