BLASTX nr result

ID: Cimicifuga21_contig00035026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035026
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33638.1| unnamed protein product [Thellungiella halophila]     143   1e-32
gb|AAM97011.1| expressed protein [Arabidopsis thaliana] gi|23197...   140   8e-32
ref|NP_563815.1| photosystem I subunit O [Arabidopsis thaliana] ...   140   8e-32
ref|XP_002892455.1| hypothetical protein ARALYDRAFT_470899 [Arab...   139   2e-31
ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209...   135   5e-30

>dbj|BAJ33638.1| unnamed protein product [Thellungiella halophila]
          Length = 142

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/73 (90%), Positives = 70/73 (95%)
 Frame = +2

Query: 2   LRLAQASGGRFTCFEQNWLRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFNSIGTELA 181
           LRLA ASGGRFTCFE+NWLRRDLNV+GFGLIGWLAPSSIP ING SLTGLFF+SIGTELA
Sbjct: 39  LRLAGASGGRFTCFERNWLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELA 98

Query: 182 HFPSPPALTSQFW 220
           HFP+PPALTSQFW
Sbjct: 99  HFPTPPALTSQFW 111


>gb|AAM97011.1| expressed protein [Arabidopsis thaliana] gi|23197966|gb|AAN15510.1|
           expressed protein [Arabidopsis thaliana]
          Length = 140

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/73 (89%), Positives = 69/73 (94%)
 Frame = +2

Query: 2   LRLAQASGGRFTCFEQNWLRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFNSIGTELA 181
           LRLA ASGGR TCFE+NWLRRDLNV+GFGLIGWLAPSSIP ING SLTGLFF+SIGTELA
Sbjct: 39  LRLAGASGGRVTCFERNWLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELA 98

Query: 182 HFPSPPALTSQFW 220
           HFP+PPALTSQFW
Sbjct: 99  HFPTPPALTSQFW 111


>ref|NP_563815.1| photosystem I subunit O [Arabidopsis thaliana]
           gi|15293053|gb|AAK93637.1| unknown protein [Arabidopsis
           thaliana] gi|20259137|gb|AAM14284.1| unknown protein
           [Arabidopsis thaliana] gi|21592969|gb|AAM64918.1|
           putative 16kDa membrane protein [Arabidopsis thaliana]
           gi|21702253|emb|CAD37939.1| photosystem I subunit O
           [Arabidopsis thaliana] gi|332190162|gb|AEE28283.1|
           photosystem I subunit O [Arabidopsis thaliana]
          Length = 140

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/73 (89%), Positives = 69/73 (94%)
 Frame = +2

Query: 2   LRLAQASGGRFTCFEQNWLRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFNSIGTELA 181
           LRLA ASGGR TCFE+NWLRRDLNV+GFGLIGWLAPSSIP ING SLTGLFF+SIGTELA
Sbjct: 39  LRLAGASGGRVTCFERNWLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELA 98

Query: 182 HFPSPPALTSQFW 220
           HFP+PPALTSQFW
Sbjct: 99  HFPTPPALTSQFW 111


>ref|XP_002892455.1| hypothetical protein ARALYDRAFT_470899 [Arabidopsis lyrata subsp.
           lyrata] gi|297338297|gb|EFH68714.1| hypothetical protein
           ARALYDRAFT_470899 [Arabidopsis lyrata subsp. lyrata]
          Length = 140

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/73 (87%), Positives = 69/73 (94%)
 Frame = +2

Query: 2   LRLAQASGGRFTCFEQNWLRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFNSIGTELA 181
           LRLA ASGGR TCFE+NWLRRDLNV+GFGLIGWLAPSSIP ING SLTGLFF+SIGTELA
Sbjct: 39  LRLAGASGGRVTCFERNWLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELA 98

Query: 182 HFPSPPALTSQFW 220
           HFP+PPA+TSQFW
Sbjct: 99  HFPTPPAVTSQFW 111


>ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209111 [Cucumis sativus]
          Length = 146

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/73 (84%), Positives = 68/73 (93%)
 Frame = +2

Query: 2   LRLAQASGGRFTCFEQNWLRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFNSIGTELA 181
           L +A ASGG+FTCFE++WLRRDLNVIGFGLIGW+APSSIPVI+G SLTGLFF SIG ELA
Sbjct: 43  LSVAGASGGKFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELA 102

Query: 182 HFPSPPALTSQFW 220
           HFPSPPALTSQFW
Sbjct: 103 HFPSPPALTSQFW 115


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