BLASTX nr result

ID: Cimicifuga21_contig00034876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034876
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    72   6e-11
dbj|BAJ23914.1| transposase [Saintpaulia hybrid cultivar]              62   4e-08
emb|CAB82966.1| putative protein [Arabidopsis thaliana]                60   2e-07
gb|AAG51228.1|AC035249_3 Tam3-like transposon protein; 93317-954...    58   9e-07

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/100 (36%), Positives = 56/100 (56%)
 Frame = +1

Query: 112 KRVGPPKAQDWRNASVFVAFLKVFYDMTLKVSMTLQPAVHETFQELISIEAEINGLFQGE 291
           ++ GPP  +DW NA VFV FLK+F+D+TL++S +L    +  F +L  I   I    +  
Sbjct: 263 RKKGPPLVEDWDNARVFVKFLKIFFDVTLRISGSLFTTSNAYFHKLCLIRNLIRKYLKSN 322

Query: 292 NVMSFXXXXXXXXSEARKVLNDMAEGMRVKFDKYWGNLDK 411
           +++                L+DMA+ M+ K+DKYWGNL +
Sbjct: 323 DLL----------------LSDMAQNMKAKYDKYWGNLKR 346


>dbj|BAJ23914.1| transposase [Saintpaulia hybrid cultivar]
          Length = 742

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/100 (34%), Positives = 52/100 (52%)
 Frame = +1

Query: 109 RKRVGPPKAQDWRNASVFVAFLKVFYDMTLKVSMTLQPAVHETFQELISIEAEINGLFQG 288
           +KRVGPP  +DW  A VFV FLK FYD TL++S + +      ++E++S+   IN     
Sbjct: 399 KKRVGPPMEKDWEKAQVFVNFLKRFYDTTLQLSASKKTTSPLIWEEIVSLGTIINDTI-- 456

Query: 289 ENVMSFXXXXXXXXSEARKVLNDMAEGMRVKFDKYWGNLD 408
                         +     L ++++ M  KF KYWG+L+
Sbjct: 457 -------------VNTLDPSLQEVSKKMETKFKKYWGDLE 483


>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/101 (32%), Positives = 48/101 (47%)
 Frame = +1

Query: 109 RKRVGPPKAQDWRNASVFVAFLKVFYDMTLKVSMTLQPAVHETFQELISIEAEINGLFQG 288
           +KR GPP A DW NA   V FLK FYD TL  S +++   +  + E+  I++ +  +   
Sbjct: 383 KKRDGPPMAIDWDNARHMVRFLKAFYDSTLAFSSSIKVTSNGCYNEICKIQSSVQKMAFS 442

Query: 289 ENVMSFXXXXXXXXSEARKVLNDMAEGMRVKFDKYWGNLDK 411
           ++                  L +MA  M  KFDKYW   +K
Sbjct: 443 QD----------------SDLREMASAMTAKFDKYWEGTEK 467


>gb|AAG51228.1|AC035249_3 Tam3-like transposon protein; 93317-95488 [Arabidopsis thaliana]
           gi|12323055|gb|AAG51515.1|AC068324_3 hAT-element
           transposase, putative [Arabidopsis thaliana]
          Length = 723

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/97 (34%), Positives = 46/97 (47%)
 Frame = +1

Query: 106 GRKRVGPPKAQDWRNASVFVAFLKVFYDMTLKVSMTLQPAVHETFQELISIEAEINGLFQ 285
           G KR+GPP   DWR     V FL +FY  TL VS +     ++ + E+++IE  + G+  
Sbjct: 402 GEKRIGPPTTIDWREVERLVKFLGLFYTATLVVSASSIVCSYKCYGEIVTIEKNLLGMTH 461

Query: 286 GENVMSFXXXXXXXXSEARKVLNDMAEGMRVKFDKYW 396
             +                K L + A  MR KFDKYW
Sbjct: 462 SYD----------------KELREKAVEMREKFDKYW 482


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