BLASTX nr result

ID: Cimicifuga21_contig00034841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034841
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267...    80   2e-13
ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp....    60   2e-07
emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|72694...    58   7e-07

>ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267326 [Vitis vinifera]
          Length = 557

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = -1

Query: 419 LPQTIGGKSVLWCKPGVVPKLMGLEAMPVTITRKGSKGRVGCTVKKQNL-XXXXXXXXXX 243
           LP T+ G+SV+WCKPGVV KLMGLE MPV ++   S  ++   V +QNL           
Sbjct: 207 LPSTLAGESVIWCKPGVVAKLMGLEVMPVPVSCNRSTEKLNSIVNRQNLRRRAQRHEMER 266

Query: 242 XRFAMGMNGC--REISEIRSSCSTTNDYCVMKPIS 144
            RF M MNGC   +     +SCS T  YCVM+P++
Sbjct: 267 RRFVMDMNGCGATQRQGTMASCSKTGRYCVMRPLA 301


>ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|222844868|gb|EEE82415.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -1

Query: 425 LNLPQTIGGKSVLWCKPGVVPKLMGLEAMPVTITRKGSKGRVGCTVKKQNLXXXXXXXXX 246
           L+LP T+ G+ V+WCKPGVV KLMGLEAMPV I  +  K  +   +K+QNL         
Sbjct: 161 LSLPPTLAGERVVWCKPGVVAKLMGLEAMPVPINSREDKETLASIIKRQNLRRRAERHEI 220

Query: 245 XXRFAMGMNGCREISEIRSSCSTTN--DYCVMKPIS 144
             R A  ++    I   RSS  + +   YCV KP++
Sbjct: 221 ERRLAGDVSAFDGIKRGRSSMPSCSKPGYCVTKPVA 256


>ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313401|gb|EFH43824.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 647

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/98 (34%), Positives = 54/98 (55%)
 Frame = -1

Query: 419 LPQTIGGKSVLWCKPGVVPKLMGLEAMPVTITRKGSKGRVGCTVKKQNLXXXXXXXXXXX 240
           LP+T+ G+SV+WCK GVV KLMGLE +PV +  K  K ++G  +K++ L           
Sbjct: 549 LPRTVAGESVVWCKTGVVAKLMGLEMIPVPVKGKTGKDKLGTLLKRERLRRRER------ 602

Query: 239 RFAMGMNGCREISEIRSSCSTTNDYCVMKPISPIEHPT 126
              + +NG R      +SCS +  + + +PI  +  P+
Sbjct: 603 --TLDING-RTGPTTEASCS-SGGFNITRPIGAVGSPS 636


>emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|7269494|emb|CAB79497.1|
           putative protein [Arabidopsis thaliana]
          Length = 619

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/98 (34%), Positives = 53/98 (54%)
 Frame = -1

Query: 419 LPQTIGGKSVLWCKPGVVPKLMGLEAMPVTITRKGSKGRVGCTVKKQNLXXXXXXXXXXX 240
           LP+T+ G+SV+WCK GVV KLMGLE +PV    K  K ++G  +K++ L           
Sbjct: 521 LPRTVAGESVVWCKTGVVAKLMGLEMIPVPDKGKSGKDKLGTLLKRERLRRRER------ 574

Query: 239 RFAMGMNGCREISEIRSSCSTTNDYCVMKPISPIEHPT 126
              + +NG R      +SCS +  + + +PI  +  P+
Sbjct: 575 --TLDVNG-RTGPTTEASCS-SGGFNITRPIGAVGSPS 608


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