BLASTX nr result

ID: Cimicifuga21_contig00034827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034827
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328759.1| predicted protein [Populus trichocarpa] gi|2...    70   5e-19
ref|XP_002519934.1| reticulon3-A3, putative [Ricinus communis] g...    69   1e-18
ref|XP_003538927.1| PREDICTED: uncharacterized protein LOC100789...    68   2e-18
ref|XP_003517099.1| PREDICTED: uncharacterized protein LOC100776...    68   2e-18
ref|XP_002881404.1| hypothetical protein ARALYDRAFT_902666 [Arab...    67   4e-18

>ref|XP_002328759.1| predicted protein [Populus trichocarpa] gi|222839057|gb|EEE77408.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score = 69.7 bits (169), Expect(2) = 5e-19
 Identities = 31/51 (60%), Positives = 37/51 (72%)
 Frame = -1

Query: 252 RITRFFKKTGKEWKNMLLTDEKIWDQSGFNKIAQKQLGPSVDAECAAVYAF 100
           R T   KK  +EWK+MLL D+KIWDQ+GFN I +KQLGPSVD +    YAF
Sbjct: 275 RPTESAKKLAREWKDMLLADDKIWDQNGFNDIVRKQLGPSVDGDSGLAYAF 325



 Score = 49.3 bits (116), Expect(2) = 5e-19
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -2

Query: 86  FFVKILYQQLGLEPYAVHTAFQYAGTE 6
           +FV+ +YQQL LEPYAVHT FQYAGTE
Sbjct: 345 YFVQAMYQQLRLEPYAVHTTFQYAGTE 371


>ref|XP_002519934.1| reticulon3-A3, putative [Ricinus communis]
           gi|223540980|gb|EEF42538.1| reticulon3-A3, putative
           [Ricinus communis]
          Length = 639

 Score = 68.6 bits (166), Expect(2) = 1e-18
 Identities = 31/51 (60%), Positives = 37/51 (72%)
 Frame = -1

Query: 252 RITRFFKKTGKEWKNMLLTDEKIWDQSGFNKIAQKQLGPSVDAECAAVYAF 100
           R T   KK  KEWK +LL D+KIWDQ+GFN I ++QLGPSVD +   VYAF
Sbjct: 277 RPTESSKKLAKEWKEILLADDKIWDQNGFNDIVRRQLGPSVDDDSGLVYAF 327



 Score = 49.3 bits (116), Expect(2) = 1e-18
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -2

Query: 86  FFVKILYQQLGLEPYAVHTAFQYAGTE 6
           +FV+ +YQQL LEPYAVHT FQYAGTE
Sbjct: 347 YFVQAMYQQLRLEPYAVHTTFQYAGTE 373


>ref|XP_003538927.1| PREDICTED: uncharacterized protein LOC100789338 [Glycine max]
          Length = 632

 Score = 68.2 bits (165), Expect(2) = 2e-18
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 8/64 (12%)
 Frame = -1

Query: 252 RITRFFKKTGKEWKNMLLTDEKIWDQSGFNKIAQKQLGPSVDAECAAVYAF--------L 97
           R T   KK  KEWK +LL D+KIWDQ+GFN I  +QLGPSVD +   VYA+        L
Sbjct: 269 RPTESAKKLAKEWKELLLADDKIWDQNGFNDIVHRQLGPSVDEDSGLVYAYDGNLKLGIL 328

Query: 96  PTSI 85
           P+SI
Sbjct: 329 PSSI 332



 Score = 49.3 bits (116), Expect(2) = 2e-18
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -2

Query: 86  FFVKILYQQLGLEPYAVHTAFQYAGTE 6
           +FV+ +YQQL LEPYAVHT FQYAGTE
Sbjct: 339 YFVQAMYQQLRLEPYAVHTTFQYAGTE 365


>ref|XP_003517099.1| PREDICTED: uncharacterized protein LOC100776463 [Glycine max]
          Length = 627

 Score = 68.2 bits (165), Expect(2) = 2e-18
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 8/64 (12%)
 Frame = -1

Query: 252 RITRFFKKTGKEWKNMLLTDEKIWDQSGFNKIAQKQLGPSVDAECAAVYAF--------L 97
           R T   KK  KEWK +LL D+KIWDQ+GFN I  +QLGPSVD +   VYA+        L
Sbjct: 264 RPTESAKKLAKEWKELLLADDKIWDQNGFNDIVHRQLGPSVDEDSGLVYAYDGNLKLGIL 323

Query: 96  PTSI 85
           P+SI
Sbjct: 324 PSSI 327



 Score = 49.3 bits (116), Expect(2) = 2e-18
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -2

Query: 86  FFVKILYQQLGLEPYAVHTAFQYAGTE 6
           +FV+ +YQQL LEPYAVHT FQYAGTE
Sbjct: 334 YFVQAMYQQLRLEPYAVHTTFQYAGTE 360


>ref|XP_002881404.1| hypothetical protein ARALYDRAFT_902666 [Arabidopsis lyrata subsp.
           lyrata] gi|297327243|gb|EFH57663.1| hypothetical protein
           ARALYDRAFT_902666 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score = 66.6 bits (161), Expect(2) = 4e-18
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = -1

Query: 252 RITRFFKKTGKEWKNMLLTDEKIWDQSGFNKIAQKQLGPSVDAECAAVYAF 100
           R T   KK  KEWK +LL D+K+WDQ+GFN+I ++QLGPSVD +    YA+
Sbjct: 277 RPTESAKKLAKEWKEILLADDKVWDQNGFNEIVRRQLGPSVDGDSGLFYAY 327



 Score = 49.3 bits (116), Expect(2) = 4e-18
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -2

Query: 86  FFVKILYQQLGLEPYAVHTAFQYAGTE 6
           +FV+ +YQQL LEPYAVHT FQYAGTE
Sbjct: 347 YFVQAMYQQLRLEPYAVHTTFQYAGTE 373


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