BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034825
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...    71   8e-11
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...    70   2e-10
ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...    67   2e-09
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...    66   3e-09

>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = -2

Query: 415 LVQPLHMKGIVSSSSCYIDPLHFLGYLCGADQVVEKSSEKFQRRK---AKSFAACSKSID 245
           LVQP  MKGIVSSSSCYI+P+++ G LC  +   ++  +K+++++    ++ + C K I 
Sbjct: 334 LVQPTSMKGIVSSSSCYINPVYYFGRLCRENWSAQRMRDKYEKKEVVDVQTKSYCGKYIP 393

Query: 244 LSVKRERYTKFGRIRTSRVSVLRKLRRGAKIVE 146
           +   ++R T     R SRV  LR++R GAKI E
Sbjct: 394 MGAAKKRRTG----RVSRVRALRRIRHGAKIEE 422


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
 Frame = -2

Query: 415 LVQPLHMKGIVSSSSCYIDPLHFLGYLCGADQVVEKSSEKFQRR--------KAKSFAAC 260
           LVQP+++KGIVSSS CYI+PL++ G LCG +   ++   K +RR        K KS +  
Sbjct: 335 LVQPINIKGIVSSSFCYIEPLYYFGGLCGVNPSSQRLPRKSERREKYENIEAKTKSNSGS 394

Query: 259 SKSIDLSVKRERYTKFGRIRTSRVSVLRKLRRGAKIVE 146
           S   D +  R+R   F      RVS+LR+ +RG KIVE
Sbjct: 395 SNFTD-AENRKRKIDFLGSHLRRVSILRRAQRGVKIVE 431


>ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 437

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 12/105 (11%)
 Frame = -2

Query: 415 LVQPLHMKGIVSSSSCYIDPLHFLGYLC----GADQVVEKSSEKFQRRKAKSFAACSKSI 248
           LV+P  +KGIVSSSSCYI+P+++ G LC      DQV E    K   ++ +  A  SK++
Sbjct: 329 LVKPTTLKGIVSSSSCYIEPMYYFGRLCPGNQQTDQVHEGCKGKENGKREREEAVRSKTL 388

Query: 247 ----DLSVKRER----YTKFGRIRTSRVSVLRKLRRGAKIVEAVD 137
               +    R+R      +F  +  SR+S+LRK RRGAKI E  D
Sbjct: 389 FEGDNFETGRDRGKALKGRFSGVHVSRLSILRKKRRGAKIQEHDD 433


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
 Frame = -2

Query: 415 LVQPLHMKGIVSSSSCYIDPLHFLGYLCGADQVVEKSSEKFQRRKAKSFAACSKSIDLS- 239
           L+ P  +KGIVSSSSCYI+PL++ G LCGA Q V K   K +R +        K +D+  
Sbjct: 334 LICPTTIKGIVSSSSCYIEPLYYFGRLCGAKQPVNKFHHKKERTE-----KVEKDVDIKF 388

Query: 238 VKRERYTKFG----RIRTSRVSVLRKLRRGAKIVE 146
           V  ++ T  G     +R  RVS LR+++RGA++ E
Sbjct: 389 VNWKKGTNAGILNAGVRLGRVSALRRVQRGARLQE 423