BLASTX nr result

ID: Cimicifuga21_contig00034808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034808
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305069.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
emb|CBI30685.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]     82   3e-14
ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_003524203.1| PREDICTED: protein SCAR3-like [Glycine max]        70   2e-10

>ref|XP_002305069.1| predicted protein [Populus trichocarpa] gi|222848033|gb|EEE85580.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   PPLPPLQWRVMKPHDNLVEGNQDCISEAFTYQNSQEALVFNMSEQHKTTPPRQPHTQESN 182
           PPLPP+QWRV KP+ ++ EG    +SE   +    + L   + +Q K +P       E  
Sbjct: 145 PPLPPVQWRVSKPNSDISEGKLHALSEGHEHGFDIKPLESTVPQQPKPSPADDHKMNEDT 204

Query: 183 TS-PPEGEEEEQGKLSGHKVANQAQNGAVMDEKEDFLHQIRSKS 311
            +  P+ +E++Q KL+ HK ANQ  NG  +DEK+DFLHQIR+KS
Sbjct: 205 IAFKPKSKEQDQQKLNCHKEANQYANGKDIDEKDDFLHQIRTKS 248


>emb|CBI30685.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3    PPLPPLQWRVMKPHDNLVEGNQDCISEAFTYQNSQEALVFNMSEQHKTTPPRQPHTQESN 182
            PPLPPLQWR +KP  ++ E  Q  ISEA  +    + L    S+  +    RQ    E+N
Sbjct: 685  PPLPPLQWRALKPDSDMAEEKQYVISEALDHLFDLKLLESTDSQHSEPVLARQQQNVEAN 744

Query: 183  TSPPEG---EEEEQGKLSGHKVANQAQNGAVMDEKEDFLHQIRSKS 311
               P+    E++++ K +G K  N+A NG  MDE+EDFL QIR+KS
Sbjct: 745  ACKPKSNVIEKQDRQKSNGQKEVNEAANGKKMDEREDFLEQIRTKS 790


>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
          Length = 1135

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3    PPLPPLQWRVMKPHDNLVEGNQDCISEAFTYQNSQEALVFNMSEQHKTTPPRQPHTQESN 182
            PPLPPLQWR +KP  ++ E  Q  ISEA  +    + L    S+  +    RQ    E+N
Sbjct: 979  PPLPPLQWRALKPDSDMAEEKQYVISEALDHLFDLKLLESTDSQHSEPVLARQQQNVEAN 1038

Query: 183  TSPPEG---EEEEQGKLSGHKVANQAQNGAVMDEKEDFLHQIRSKS 311
               P+    E++++ K +G K  N+A NG  MDE+EDFL QIR+KS
Sbjct: 1039 ACKPKSNVIEKQDRQKSNGQKEVNEAANGKKMDEREDFLEQIRTKS 1084


>ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|222859890|gb|EEE97437.1|
            predicted protein [Populus trichocarpa]
          Length = 937

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/103 (40%), Positives = 56/103 (54%)
 Frame = +3

Query: 3    PPLPPLQWRVMKPHDNLVEGNQDCISEAFTYQNSQEALVFNMSEQHKTTPPRQPHTQESN 182
            PPLPP+QWRV KPH  + EG Q  +S+A  +    + L   + +Q K  P  +   +E  
Sbjct: 792  PPLPPVQWRVSKPHSGISEGKQHSLSKAHEHAFDIKPLESTVPQQPKPAPAVEQKMKEDT 851

Query: 183  TSPPEGEEEEQGKLSGHKVANQAQNGAVMDEKEDFLHQIRSKS 311
             +          K    K ANQ+ NG  +DEKEDFLHQIR+KS
Sbjct: 852  IA---------FKPKSKKEANQSANGKDIDEKEDFLHQIRTKS 885


>ref|XP_003524203.1| PREDICTED: protein SCAR3-like [Glycine max]
          Length = 1236

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
 Frame = +3

Query: 3    PPLPPLQWRVMKPHDNLVEGNQDCISEAFTYQNSQEALVFNMSEQHKTTPPRQ------P 164
            PPLPP QWRV KP  ++  G Q C+SE   +          + +Q + T   Q       
Sbjct: 1077 PPLPPTQWRVSKPQLDMTSGTQYCMSEDAEHIGDHSLPDSTILQQPRVTQVEQIQINHDD 1136

Query: 165  HTQESNTSPPEGEEEEQGKLSGHKVANQAQNGAVMDEKEDFLHQIRSKS 311
            H    N      ++ +Q KL G K ANQ + G  +DE+EDFL+QIR+K+
Sbjct: 1137 HESYDNIIYKLKDKLDQQKLKGQKEANQLRMGKEIDEREDFLYQIRTKA 1185


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