BLASTX nr result

ID: Cimicifuga21_contig00034717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034717
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001151465.1| LOC100285098 [Zea mays] gi|195646972|gb|ACG4...   186   1e-45
ref|XP_002523907.1| eukaryotic translation elongation factor, pu...   186   2e-45
tpg|DAA52377.1| TPA: putative translation elongation factor fami...   185   4e-45
gb|AFW85122.1| putative translation elongation factor family pro...   185   4e-45
gb|AET97562.1| elongation factor [Ziziphus jujuba]                    183   1e-44

>ref|NP_001151465.1| LOC100285098 [Zea mays] gi|195646972|gb|ACG42954.1| elongation
           factor 2 [Zea mays] gi|414873821|tpg|DAA52378.1| TPA:
           putative translation elongation factor family protein
           isoform 1 [Zea mays] gi|414873822|tpg|DAA52379.1| TPA:
           putative translation elongation factor family protein
           isoform 2 [Zea mays] gi|414873824|tpg|DAA52381.1| TPA:
           putative translation elongation factor family protein
           isoform 1 [Zea mays] gi|414873825|tpg|DAA52382.1| TPA:
           putative translation elongation factor family protein
           isoform 2 [Zea mays]
          Length = 843

 Score =  186 bits (473), Expect = 1e-45
 Identities = 84/132 (63%), Positives = 108/132 (81%)
 Frame = +1

Query: 1   SSGLHGWAFTLANFSYMYAPKMGLDETDMMDKLWGEHYFDPATRSWTDIKTTSPSCKRGF 180
           S+GLHGWAFTL NF+ MYA K G+DET MM++LWGE++FDPAT+ WT   T SP+CKRGF
Sbjct: 212 SAGLHGWAFTLTNFAKMYASKFGVDETKMMERLWGENFFDPATKKWTTKNTGSPTCKRGF 271

Query: 181 VQFCYEPIKQAVKACMVDDKGKLWRILRILGVTLKAEDKVLDGEALVNCVLRSWLPATSA 360
           VQFCYEPIKQ +K CM D K KLW +L+ L VT+KA++K L G+AL+  V+++WLPA++A
Sbjct: 272 VQFCYEPIKQIIKTCMNDQKEKLWPMLQKLNVTMKADEKELIGKALMKRVMQTWLPASTA 331

Query: 361 LLEMMVCNLP*P 396
           LLEMM+ +LP P
Sbjct: 332 LLEMMIFHLPSP 343


>ref|XP_002523907.1| eukaryotic translation elongation factor, putative [Ricinus
           communis] gi|223536837|gb|EEF38476.1| eukaryotic
           translation elongation factor, putative [Ricinus
           communis]
          Length = 843

 Score =  186 bits (472), Expect = 2e-45
 Identities = 83/132 (62%), Positives = 108/132 (81%)
 Frame = +1

Query: 1   SSGLHGWAFTLANFSYMYAPKMGLDETDMMDKLWGEHYFDPATRSWTDIKTTSPSCKRGF 180
           S+GLHGWAFTL NF+ MYA K G+DE+ MM++LWGE++FDPAT+ WT   T SP+CKRGF
Sbjct: 212 SAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSPTCKRGF 271

Query: 181 VQFCYEPIKQAVKACMVDDKGKLWRILRILGVTLKAEDKVLDGEALVNCVLRSWLPATSA 360
           VQFCYEPIKQ +  CM D K KLW +L+ LGVT+K+++K L G+AL+  V+++WLPA+SA
Sbjct: 272 VQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKELMGKALMKRVMQTWLPASSA 331

Query: 361 LLEMMVCNLP*P 396
           LLEMM+ +LP P
Sbjct: 332 LLEMMIFHLPSP 343


>tpg|DAA52377.1| TPA: putative translation elongation factor family protein [Zea
           mays]
          Length = 843

 Score =  185 bits (469), Expect = 4e-45
 Identities = 83/132 (62%), Positives = 108/132 (81%)
 Frame = +1

Query: 1   SSGLHGWAFTLANFSYMYAPKMGLDETDMMDKLWGEHYFDPATRSWTDIKTTSPSCKRGF 180
           S+GLHGWAFTL NF+ MYA K G+DE+ MM++LWGE++FDPAT+ WT   T SP+CKRGF
Sbjct: 212 SAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKRGF 271

Query: 181 VQFCYEPIKQAVKACMVDDKGKLWRILRILGVTLKAEDKVLDGEALVNCVLRSWLPATSA 360
           VQFCYEPIKQ +K CM D K KLW +L+ L VT+KA++K L G+AL+  V+++WLPA++A
Sbjct: 272 VQFCYEPIKQIIKTCMNDQKEKLWPMLQKLNVTMKADEKELIGKALMKRVMQTWLPASTA 331

Query: 361 LLEMMVCNLP*P 396
           LLEMM+ +LP P
Sbjct: 332 LLEMMIFHLPSP 343


>gb|AFW85122.1| putative translation elongation factor family protein [Zea mays]
          Length = 843

 Score =  185 bits (469), Expect = 4e-45
 Identities = 83/132 (62%), Positives = 108/132 (81%)
 Frame = +1

Query: 1   SSGLHGWAFTLANFSYMYAPKMGLDETDMMDKLWGEHYFDPATRSWTDIKTTSPSCKRGF 180
           S+GLHGWAFTL NF+ MYA K G+DE+ MM++LWGE++FDPAT+ WT   T SP+CKRGF
Sbjct: 212 SAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKRGF 271

Query: 181 VQFCYEPIKQAVKACMVDDKGKLWRILRILGVTLKAEDKVLDGEALVNCVLRSWLPATSA 360
           VQFCYEPIKQ +K CM D K KLW +L+ L VT+KA++K L G+AL+  V+++WLPA++A
Sbjct: 272 VQFCYEPIKQIIKTCMNDQKEKLWPMLQKLNVTMKADEKELIGKALMKRVMQTWLPASTA 331

Query: 361 LLEMMVCNLP*P 396
           LLEMM+ +LP P
Sbjct: 332 LLEMMIFHLPSP 343


>gb|AET97562.1| elongation factor [Ziziphus jujuba]
          Length = 843

 Score =  183 bits (465), Expect = 1e-44
 Identities = 82/132 (62%), Positives = 107/132 (81%)
 Frame = +1

Query: 1   SSGLHGWAFTLANFSYMYAPKMGLDETDMMDKLWGEHYFDPATRSWTDIKTTSPSCKRGF 180
           S+GLHGWAFTL NF+ MYA K G+DE+ MM++LWGE++FDPAT+ WT   T SP+CKRGF
Sbjct: 212 SAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKRGF 271

Query: 181 VQFCYEPIKQAVKACMVDDKGKLWRILRILGVTLKAEDKVLDGEALVNCVLRSWLPATSA 360
           VQFCYEPIKQ +  CM D K KLW +L+ LG T+K+E+K L G+AL+  V+++WLPA++A
Sbjct: 272 VQFCYEPIKQIINTCMNDQKDKLWPMLQKLGCTMKSEEKDLMGKALMKRVMQTWLPASNA 331

Query: 361 LLEMMVCNLP*P 396
           LLEMM+ +LP P
Sbjct: 332 LLEMMIFHLPPP 343


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