BLASTX nr result

ID: Cimicifuga21_contig00034675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034675
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   269   2e-70
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   269   2e-70
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi...   268   4e-70
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   267   6e-70
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...   267   8e-70

>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 849

 Score =  269 bits (688), Expect = 2e-70
 Identities = 127/166 (76%), Positives = 152/166 (91%)
 Frame = -2

Query: 499  LDEAWDFIQQMPIEPGISVFGAMLGACKIHKNVKLGEMAAKRLFELEPTEGGYHVLLANI 320
            L+EAWDFIQ+MPIEP ISVFGAMLGAC+IHKNV+LGE AA R+F+L+P +GGYHVLLANI
Sbjct: 631  LNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANI 690

Query: 319  YAAASMWKDVAKVRTTMKRKGLQKTPGCSLVELRNEVHTFYSGSTAHPQSEKIYAKLEAL 140
            YA ASMW  VA+VRTTM++KG+QKTPG S+VEL+NEVHTFYSG+T+HPQ++KIYA LE L
Sbjct: 691  YATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETL 750

Query: 139  VNEIKAAGYVPDTNSIHDVEDDVQEQLLSTHSEKLAIAFGLINTTP 2
             N IKAAGY+PDTNS+HDVED V+EQLL++HSEKLAIAF L+NT+P
Sbjct: 751  GNRIKAAGYMPDTNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSP 796


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  269 bits (687), Expect = 2e-70
 Identities = 128/166 (77%), Positives = 149/166 (89%)
 Frame = -2

Query: 499  LDEAWDFIQQMPIEPGISVFGAMLGACKIHKNVKLGEMAAKRLFELEPTEGGYHVLLANI 320
            + EAWDFI+ MPI PGI+V+GAMLGACKIHKN+++GE AAK+LFEL P EGGYHVLLANI
Sbjct: 603  IKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANI 662

Query: 319  YAAASMWKDVAKVRTTMKRKGLQKTPGCSLVELRNEVHTFYSGSTAHPQSEKIYAKLEAL 140
            YA+ S W  VA+VR TM++KGL+KTPGCS+VELRNEVH+FYSGST HPQS++IYA LE L
Sbjct: 663  YASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 722

Query: 139  VNEIKAAGYVPDTNSIHDVEDDVQEQLLSTHSEKLAIAFGLINTTP 2
            V EIKAAGYVPDTN I DVEDDVQEQLL++HSEKLAIAFGL+NT+P
Sbjct: 723  VYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSP 768


>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 818

 Score =  268 bits (684), Expect = 4e-70
 Identities = 128/166 (77%), Positives = 151/166 (90%)
 Frame = -2

Query: 499  LDEAWDFIQQMPIEPGISVFGAMLGACKIHKNVKLGEMAAKRLFELEPTEGGYHVLLANI 320
            LD+AW+FIQ+MPI+PGISV GAMLGACKIHKNV+LGE AA++LF+L+P EGGYHVLLANI
Sbjct: 600  LDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANI 659

Query: 319  YAAASMWKDVAKVRTTMKRKGLQKTPGCSLVELRNEVHTFYSGSTAHPQSEKIYAKLEAL 140
            YA+ SMW  VAKVRT M+ KGL KTPGCS VELRNE+HTFYSGST HP+S+KIYA LE L
Sbjct: 660  YASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETL 719

Query: 139  VNEIKAAGYVPDTNSIHDVEDDVQEQLLSTHSEKLAIAFGLINTTP 2
             +EIKAAGYVPD +SIHDVE+DV++QLLS+HSE+LAIAFGL+NT+P
Sbjct: 720  GDEIKAAGYVPDPDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSP 765


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  267 bits (683), Expect = 6e-70
 Identities = 127/165 (76%), Positives = 150/165 (90%)
 Frame = -2

Query: 499 LDEAWDFIQQMPIEPGISVFGAMLGACKIHKNVKLGEMAAKRLFELEPTEGGYHVLLANI 320
           L++AWDFIQ+MPI+PGI+V+GAMLGACKIHKNV LGE AA  +F+L P +GGYHVLLANI
Sbjct: 486 LNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANI 545

Query: 319 YAAASMWKDVAKVRTTMKRKGLQKTPGCSLVELRNEVHTFYSGSTAHPQSEKIYAKLEAL 140
           YA ASMW  VAKVRT M++ GLQKTPGCSLVE+ NEVH+FYSG+T+HPQS+KIY+ LE L
Sbjct: 546 YATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETL 605

Query: 139 VNEIKAAGYVPDTNSIHDVEDDVQEQLLSTHSEKLAIAFGLINTT 5
           V+EI+AAGYVPDTNSIHDVEDDV+ QLL+THSEKLAIAFGL+NT+
Sbjct: 606 VDEIRAAGYVPDTNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTS 650


>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 816

 Score =  267 bits (682), Expect = 8e-70
 Identities = 125/164 (76%), Positives = 149/164 (90%)
 Frame = -2

Query: 499  LDEAWDFIQQMPIEPGISVFGAMLGACKIHKNVKLGEMAAKRLFELEPTEGGYHVLLANI 320
            LD+AW FIQ MP++PGI+V GAMLGAC+IHKNV+LGE  A  LF+L+P +GGYHVLLAN+
Sbjct: 598  LDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANM 657

Query: 319  YAAASMWKDVAKVRTTMKRKGLQKTPGCSLVELRNEVHTFYSGSTAHPQSEKIYAKLEAL 140
            YA+ASMW  VA+VRT M++KG+QKTPGCSLVELRNEVHTFYSGST HPQS++IYA LE L
Sbjct: 658  YASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETL 717

Query: 139  VNEIKAAGYVPDTNSIHDVEDDVQEQLLSTHSEKLAIAFGLINT 8
             +E+KAAGYVPDTNSIHDVE+DV+EQLLS+HSE+LAIAFGL+NT
Sbjct: 718  GDEMKAAGYVPDTNSIHDVEEDVKEQLLSSHSERLAIAFGLLNT 761


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