BLASTX nr result

ID: Cimicifuga21_contig00034552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034552
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247...   157   7e-37
ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra...   157   9e-37
ref|XP_002516789.1| conserved hypothetical protein [Ricinus comm...   157   9e-37
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra...   153   2e-35
ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254...   152   3e-35

>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
            gi|297736973|emb|CBI26174.3| unnamed protein product
            [Vitis vinifera]
          Length = 1305

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/87 (89%), Positives = 80/87 (91%)
 Frame = -2

Query: 262  LATGLKDLADFLPASLATIVSYFSAEVTRGVWKPAFMNGTDWPSPAAFLSTAEEQIKKIL 83
            LATGLKDLADFLPASLATI+SYFSAEVTRGVW P FMNGTDWPSPAA LS  EEQI+KIL
Sbjct: 862  LATGLKDLADFLPASLATIISYFSAEVTRGVWNPVFMNGTDWPSPAANLSNVEEQIRKIL 921

Query: 82   AATGVDVPSLAQGGTSPATLPLPLAAF 2
            AATGVDVPSLA GG SPATLPLPLAAF
Sbjct: 922  AATGVDVPSLAAGGNSPATLPLPLAAF 948


>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Cucumis sativus]
          Length = 1311

 Score =  157 bits (397), Expect = 9e-37
 Identities = 78/87 (89%), Positives = 81/87 (93%)
 Frame = -2

Query: 262  LATGLKDLADFLPASLATIVSYFSAEVTRGVWKPAFMNGTDWPSPAAFLSTAEEQIKKIL 83
            LATGLKDLADFLPASLATIVSYFSAEVTRG+WKP +MNGTDWPSPA  LS  EEQIKKIL
Sbjct: 868  LATGLKDLADFLPASLATIVSYFSAEVTRGLWKPVYMNGTDWPSPAENLSNVEEQIKKIL 927

Query: 82   AATGVDVPSLAQGGTSPATLPLPLAAF 2
            AATGVDVPSLA GG+SPATLPLPLAAF
Sbjct: 928  AATGVDVPSLAAGGSSPATLPLPLAAF 954


>ref|XP_002516789.1| conserved hypothetical protein [Ricinus communis]
            gi|223543877|gb|EEF45403.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1325

 Score =  157 bits (397), Expect = 9e-37
 Identities = 77/87 (88%), Positives = 82/87 (94%)
 Frame = -2

Query: 262  LATGLKDLADFLPASLATIVSYFSAEVTRGVWKPAFMNGTDWPSPAAFLSTAEEQIKKIL 83
            LATGLKDLAD+LPASLATIVSYFSAEV+RGVWKP FMNGTDWPSPAA LS  EE+IKKIL
Sbjct: 883  LATGLKDLADYLPASLATIVSYFSAEVSRGVWKPVFMNGTDWPSPAANLSNVEEKIKKIL 942

Query: 82   AATGVDVPSLAQGGTSPATLPLPLAAF 2
            AATGVD+PSLA GG+SPATLPLPLAAF
Sbjct: 943  AATGVDIPSLASGGSSPATLPLPLAAF 969


>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Cucumis sativus]
          Length = 1335

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/86 (88%), Positives = 79/86 (91%)
 Frame = -2

Query: 262  LATGLKDLADFLPASLATIVSYFSAEVTRGVWKPAFMNGTDWPSPAAFLSTAEEQIKKIL 83
            LATGLKDLADFLPAS ATIVSYFSAEVTRG+WKPAFMNGTDWPSPAA LS  E+QIKKIL
Sbjct: 891  LATGLKDLADFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKIL 950

Query: 82   AATGVDVPSLAQGGTSPATLPLPLAA 5
            AATGVDVP LA GG+SPA LPLPLAA
Sbjct: 951  AATGVDVPCLAVGGSSPAMLPLPLAA 976


>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
          Length = 1321

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = -2

Query: 262  LATGLKDLADFLPASLATIVSYFSAEVTRGVWKPAFMNGTDWPSPAAFLSTAEEQIKKIL 83
            LATGLKDL+DFLPASLATI SYFSAEVTRG+WKPAFMNGTDWPSPAA LS  E+QIKK+L
Sbjct: 878  LATGLKDLSDFLPASLATIASYFSAEVTRGIWKPAFMNGTDWPSPAANLSMVEQQIKKVL 937

Query: 82   AATGVDVPSLAQGGTSPATLPLPLAA 5
            AATGVDVPSLA  G+SPATLPLPLAA
Sbjct: 938  AATGVDVPSLAAVGSSPATLPLPLAA 963


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