BLASTX nr result

ID: Cimicifuga21_contig00034531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034531
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    57   2e-06
emb|CAE03135.3| OJ000114_01.16 [Oryza sativa Japonica Group]           57   2e-06
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|EEC77333.1| hypothetical protein OsI_16009 [Oryza sativa Indi...    57   2e-06

>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6   EVIETSVLSKRWRYLWTSLPFLNFNAKYFSQLIESGSDDYPCRHFNDFVDQVLCRLQNSN 185
           +V++T VLSKRW  +W S P+L+FN + FS LI S   D    +F DF+  VL R   +N
Sbjct: 37  QVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLISSYYYDDDMNNFTDFISHVLVR--RNN 94

Query: 186 IHTFHVHLSYPSDI-YSWISCASVYS 260
           +  F + L    D  YS +     Y+
Sbjct: 95  VKAFKLSLDTRRDCQYSVVESLIYYA 120


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6   EVIETSVLSKRWRYLWTSLPFLNFNAKYFSQLIESGSDDYPCRHFNDFVDQVLCRLQNSN 185
           +V++T VLSKRW  +W S P+L+FN + FS LI S   D    +F DF+  VL R   +N
Sbjct: 56  QVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDDMNNFTDFIYHVLVR--RNN 113

Query: 186 IHTFHVHLSYPSDI-YSWISCASVYS 260
           +  F + L    D  YS +     Y+
Sbjct: 114 VKAFKLSLDTRRDCQYSVVESLIYYA 139


>emb|CAE03135.3| OJ000114_01.16 [Oryza sativa Japonica Group]
          Length = 450

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KEVIETSVLSKRWRYLWTSLPFLNFNAKYFSQLIESG-SDDYPCRHFNDFVDQVLCRLQN 179
           ++V++T +LSKRW +LW ++P L+ + + F    E+   D+   ++F DF D ++   Q 
Sbjct: 87  RQVVQTCMLSKRWEHLWRTVPCLDVDHREFQSTGEAAQGDNEVWQNFEDFADNLMLHHQI 146

Query: 180 SNIHTFHVHLSYPSDIYSWISCASVYSWIR 269
           +++ TF +H+   +++Y W   AS   WIR
Sbjct: 147 AHLDTFQLHV---NNVYRWGQHAS--RWIR 171


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = +3

Query: 6   EVIETSVLSKRWRYLWTSLPFLNFNAKYFSQLIESGSDDYPCRHFNDFVDQVLCRLQN 179
           +V++T VLSKRW  +W S P+L+FN + FS LI S   +    +F DF++QVL R  N
Sbjct: 37  QVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYEDEMVNFTDFINQVLVRRNN 94


>gb|EEC77333.1| hypothetical protein OsI_16009 [Oryza sativa Indica Group]
          Length = 396

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KEVIETSVLSKRWRYLWTSLPFLNFNAKYFSQLIESG-SDDYPCRHFNDFVDQVLCRLQN 179
           ++V++T +LSKRW +LW ++P L+ + + F    E+   D+   ++F DF D ++   Q 
Sbjct: 38  RQVVQTCMLSKRWEHLWRTVPCLDVDHREFQSTGEAAQGDNEVWQNFEDFADNLMLHHQI 97

Query: 180 SNIHTFHVHLSYPSDIYSWISCASVYSWIR 269
           +++ TF +H+   +++Y W   AS   WIR
Sbjct: 98  AHLDTFQLHV---NNVYRWGQHAS--RWIR 122


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