BLASTX nr result

ID: Cimicifuga21_contig00034432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034432
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]          161   7e-38
gb|ABU45207.1| unknown [Solanum bulbocastanum]                        158   8e-37
emb|CAA05629.1| membrane-associated salt-inducible protein like ...   155   7e-36
ref|NP_195386.1| pentatricopeptide repeat-containing protein [Ar...   155   7e-36
ref|XP_002866998.1| pentatricopeptide repeat-containing protein ...   154   1e-35

>gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 406

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/157 (49%), Positives = 100/157 (63%)
 Frame = +1

Query: 1   GCSPDVWAYNTRLMHAQLGKPEDYLVLMEEMKTKGIKPNITSYNYLFSCYCKNGLMESAH 180
           GC PDV AYN ++ + Q G PE    L+EEM   G+KP+  SYNYL +CYC+NGLM+ A 
Sbjct: 236 GCGPDVGAYNVKIRNIQGGDPEGVKALIEEMNNAGLKPDTISYNYLMTCYCENGLMDEAQ 295

Query: 181 KVCQDLEKNGCEPNSATFRLRITHLCYREDYEMAYDVFKESMRRNRVPAFRIXXXXXXXX 360
           KV +DLE NGC PN+ATFR  I +LC +  +E  Y VFKES+R N++P F          
Sbjct: 296 KVYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKVFKESVRVNKMPDFNTLKCLVEGL 355

Query: 361 XXXXXRTEAKGVIRAVKEKFPDDFLNAWNKLELELGL 471
                  +AKG+ R VK+KFP + + AW KLE ELGL
Sbjct: 356 VKREKLKDAKGMSRTVKKKFPPNLVKAWAKLEEELGL 392


>gb|ABU45207.1| unknown [Solanum bulbocastanum]
          Length = 405

 Score =  158 bits (399), Expect = 8e-37
 Identities = 75/157 (47%), Positives = 99/157 (63%)
 Frame = +1

Query: 1   GCSPDVWAYNTRLMHAQLGKPEDYLVLMEEMKTKGIKPNITSYNYLFSCYCKNGLMESAH 180
           GC PDV AYN ++M+ Q G PE    L+EEM   G+KP+  SYNYL +CYC+N L++ A 
Sbjct: 238 GCGPDVGAYNVKIMNIQGGDPEGVKALIEEMNDAGLKPDTISYNYLMTCYCRNELIDEAQ 297

Query: 181 KVCQDLEKNGCEPNSATFRLRITHLCYREDYEMAYDVFKESMRRNRVPAFRIXXXXXXXX 360
           KV  DLEKNGC PN+ATFR  I +LC +  +E  Y VFKES++  ++P F          
Sbjct: 298 KVYDDLEKNGCNPNAATFRTLIFYLCKKGRFETGYKVFKESVKVQKIPDFDTLKYLVEGL 357

Query: 361 XXXXXRTEAKGVIRAVKEKFPDDFLNAWNKLELELGL 471
                  +AKG+ R VK+KFP + + AW K+E ELGL
Sbjct: 358 AKKSKLKDAKGMCRTVKKKFPPNLIKAWTKIEEELGL 394


>emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
           thaliana]
          Length = 428

 Score =  155 bits (391), Expect = 7e-36
 Identities = 76/157 (48%), Positives = 97/157 (61%)
 Frame = +1

Query: 1   GCSPDVWAYNTRLMHAQLGKPEDYLVLMEEMKTKGIKPNITSYNYLFSCYCKNGLMESAH 180
           GC  D  AYN R+M AQ   PE    L+EEM + G+KP+  SYNYL + YC+ G+++ A 
Sbjct: 255 GCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAK 314

Query: 181 KVCQDLEKNGCEPNSATFRLRITHLCYREDYEMAYDVFKESMRRNRVPAFRIXXXXXXXX 360
           KV + LE N C PN+ATFR  I HLCY   YE  Y +FK+S+  +++P F          
Sbjct: 315 KVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGL 374

Query: 361 XXXXXRTEAKGVIRAVKEKFPDDFLNAWNKLELELGL 471
                R +AKG+IR VK+KFP  FLNAW KLE ELGL
Sbjct: 375 VENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGL 411


>ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181418|sp|Q9M065.1|PP352_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g36680, mitochondrial; Flags: Precursor
           gi|2464912|emb|CAB16807.1| salt-inducible like protein
           [Arabidopsis thaliana] gi|7270616|emb|CAB80334.1|
           salt-inducible like protein [Arabidopsis thaliana]
           gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680
           [Arabidopsis thaliana] gi|24111267|gb|AAN46757.1|
           At4g36680/C7A10_680 [Arabidopsis thaliana]
           gi|332661286|gb|AEE86686.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 412

 Score =  155 bits (391), Expect = 7e-36
 Identities = 76/157 (48%), Positives = 97/157 (61%)
 Frame = +1

Query: 1   GCSPDVWAYNTRLMHAQLGKPEDYLVLMEEMKTKGIKPNITSYNYLFSCYCKNGLMESAH 180
           GC  D  AYN R+M AQ   PE    L+EEM + G+KP+  SYNYL + YC+ G+++ A 
Sbjct: 239 GCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAK 298

Query: 181 KVCQDLEKNGCEPNSATFRLRITHLCYREDYEMAYDVFKESMRRNRVPAFRIXXXXXXXX 360
           KV + LE N C PN+ATFR  I HLCY   YE  Y +FK+S+  +++P F          
Sbjct: 299 KVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGL 358

Query: 361 XXXXXRTEAKGVIRAVKEKFPDDFLNAWNKLELELGL 471
                R +AKG+IR VK+KFP  FLNAW KLE ELGL
Sbjct: 359 VENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGL 395


>ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312834|gb|EFH43257.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 411

 Score =  154 bits (388), Expect = 1e-35
 Identities = 76/157 (48%), Positives = 96/157 (61%)
 Frame = +1

Query: 1   GCSPDVWAYNTRLMHAQLGKPEDYLVLMEEMKTKGIKPNITSYNYLFSCYCKNGLMESAH 180
           GC  D  AYN R+M AQ   PE    L+EEM T G+KP+  SYNYL + YC+ G+++ A 
Sbjct: 239 GCELDNAAYNVRIMSAQKESPERVKELIEEMSTMGLKPDTISYNYLMTAYCEKGMLDEAK 298

Query: 181 KVCQDLEKNGCEPNSATFRLRITHLCYREDYEMAYDVFKESMRRNRVPAFRIXXXXXXXX 360
           KV + LE N C PNSATFR  I HLCY   YE  Y +FK+S+  +++P F          
Sbjct: 299 KVYEGLEGNNCAPNSATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLAVGL 358

Query: 361 XXXXXRTEAKGVIRAVKEKFPDDFLNAWNKLELELGL 471
                  +AKG+IR VK+KFP  F+NAW KLE ELGL
Sbjct: 359 VEKKKIDDAKGLIRTVKKKFPPSFMNAWKKLEEELGL 395


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