BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034071
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35
ref|XP_003630936.1| Pentatricopeptide repeat-containing protein ...   153   1e-35
ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]   150   1e-34

>ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/119 (61%), Positives = 93/119 (78%)
 Frame = +3

Query: 9   DLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMR 188
           D+FVGSSLIK+YA+N ++ DA+ LFD IP KD VLWNVMLNGY K+  S     +F  MR
Sbjct: 92  DVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR 151

Query: 189 VTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKCRCL 365
            +E++ N VTFAC+LSVCA++A+++LGTQLHG+ V  G +  S VANTLLAMYSKC+CL
Sbjct: 152 HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCL 210



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/113 (30%), Positives = 64/113 (56%)
 Frame = +3

Query: 18  VGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMRVTE 197
           VGS+++ MYA    +D A R+F++I  KD + WN M+   +++ +  E   LF++M +  
Sbjct: 398 VGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG 457

Query: 198 VETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
              + V+ +  LS CA    +  G ++HGL+++    S     ++L+ MY+KC
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/117 (29%), Positives = 63/117 (53%)
 Frame = +3

Query: 6   LDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRM 185
           LD+F+ S+LI +Y     V+ A+++  +    D V+   M++GY  + K+ E    F+ +
Sbjct: 293 LDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWL 352

Query: 186 RVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
               ++   VTF+ I    A  A + LG +LHG ++++  D    V + +L MY+KC
Sbjct: 353 VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKC 409



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/119 (29%), Positives = 61/119 (51%)
 Frame = +3

Query: 3   ELDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKR 182
           ELD  V ++L+ MY+    +  AR+LFD  P  D V WN +++GY ++    E   LF+ 
Sbjct: 191 ELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRG 250

Query: 183 MRVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKCR 359
           M    ++ + +TFA  L        ++   ++HG ++R        + + L+ +Y KCR
Sbjct: 251 MISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR 309



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/94 (30%), Positives = 51/94 (54%)
 Frame = +3

Query: 9   DLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMR 188
           DL+  SSLI MYA    ++ +RR+FD++  ++ V WN +++ Y       E   LF  M 
Sbjct: 496 DLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEML 555

Query: 189 VTEVETNYVTFACILSVCATKALIELGTQLHGLV 290
              ++ ++VTF  I+S C     ++ G + + L+
Sbjct: 556 RNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLM 589


>ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/119 (61%), Positives = 93/119 (78%)
 Frame = +3

Query: 9   DLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMR 188
           D+FVGSSLIK+YA+N ++ DA+ LFD IP KD VLWNVMLNGY K+  S     +F  MR
Sbjct: 92  DVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR 151

Query: 189 VTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKCRCL 365
            +E++ N VTFAC+LSVCA++A+++LGTQLHG+ V  G +  S VANTLLAMYSKC+CL
Sbjct: 152 HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCL 210



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/113 (30%), Positives = 64/113 (56%)
 Frame = +3

Query: 18  VGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMRVTE 197
           VGS+++ MYA    +D A R+F++I  KD + WN M+   +++ +  E   LF++M +  
Sbjct: 398 VGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG 457

Query: 198 VETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
              + V+ +  LS CA    +  G ++HGL+++    S     ++L+ MY+KC
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/119 (29%), Positives = 62/119 (52%)
 Frame = +3

Query: 3   ELDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKR 182
           ELD  V ++L+ MY+    +  AR+LFD +P  D V WN +++GY ++    E   LF+ 
Sbjct: 191 ELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRG 250

Query: 183 MRVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKCR 359
           M    ++ + +TFA  L        ++   ++HG ++R        + + L+ +Y KCR
Sbjct: 251 MISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR 309



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/117 (29%), Positives = 62/117 (52%)
 Frame = +3

Query: 6   LDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRM 185
           LD+F+ S+LI +Y     V+ A++   +    D V+   M++GY  + K+ E    F+ +
Sbjct: 293 LDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWL 352

Query: 186 RVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
               ++   VTF+ I    A  A + LG +LHG ++++  D    V + +L MY+KC
Sbjct: 353 VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKC 409



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/94 (31%), Positives = 51/94 (54%)
 Frame = +3

Query: 9   DLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMR 188
           DL+  SSLI MYA    ++ +RR+FD++  K+ V WN +++ Y       E   LF  M 
Sbjct: 496 DLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEML 555

Query: 189 VTEVETNYVTFACILSVCATKALIELGTQLHGLV 290
              ++ ++VTF  I+S C     ++ G + + L+
Sbjct: 556 RNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLM 589


>ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524958|gb|AET05412.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  153 bits (387), Expect = 1e-35
 Identities = 68/117 (58%), Positives = 91/117 (77%)
 Frame = +3

Query: 6   LDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRM 185
           +DLF+GSSLIK+Y DN Y+ DA+ LFD++PV+DC+LWNVMLNGY K+   +   G F+ M
Sbjct: 210 MDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEM 269

Query: 186 RVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
           R + V+ N V+F C+LSVCAT+ ++  G QLHGLV+RSGF+S   VANT++ MYSKC
Sbjct: 270 RNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKC 326



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/113 (38%), Positives = 70/113 (61%)
 Frame = +3

Query: 18  VGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMRVTE 197
           VGSS+  MYA +  +D A + F ++PVKD V WN+M+  ++++ K +    LF++M  + 
Sbjct: 517 VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSG 576

Query: 198 VETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
            + + V+ +  LS CA    +  G +LH  VVR+ F S + VA+TL+ MYSKC
Sbjct: 577 TKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKC 629



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
 Frame = +3

Query: 3   ELDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKR 182
           E D  V +++I MY+    + DAR++FD +P  D V WN ++ GY ++  +DE   LFK 
Sbjct: 310 ESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKA 369

Query: 183 MRVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSG--FDSYSQVANTLLAMYSK 353
           M  + V+ + +TFA  L        ++   ++H  +VR G  FD Y  + + L+ +Y K
Sbjct: 370 MVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVY--LKSALVDIYFK 426



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/115 (26%), Positives = 63/115 (54%)
 Frame = +3

Query: 9   DLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMR 188
           D+++ S+L+ +Y     V+ A + F +  + D  +   M++GY  +  + E   LF+ + 
Sbjct: 413 DVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLI 472

Query: 189 VTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSK 353
              +  N +T A +L  CA  A ++LG +LH  +++ G ++  QV +++  MY+K
Sbjct: 473 QEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAK 527


>ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/118 (62%), Positives = 89/118 (75%)
 Frame = +3

Query: 3   ELDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKR 182
           ELD+FVGSSLIK Y++N  + DAR LFD++P KD VLWNVMLNGY K+   D   G+F  
Sbjct: 179 ELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFME 238

Query: 183 MRVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
           MR TE   N VTFAC+LSVCA++ +I  G+QLHGLVV SG +  S VANTLLAMY+KC
Sbjct: 239 MRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKC 296



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/119 (33%), Positives = 68/119 (57%)
 Frame = +3

Query: 3   ELDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKR 182
           E+D  V ++L+ MYA   ++ DARRLFD +P  D V WN M++GY ++   DE   LF  
Sbjct: 280 EMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHE 339

Query: 183 MRVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKCR 359
           M    ++ + +TF+  L + +  A +  G ++H  ++R+G      + + L+ +Y KCR
Sbjct: 340 MISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR 398



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/117 (31%), Positives = 66/117 (56%)
 Frame = +3

Query: 6   LDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRM 185
           LD+F+ S+LI +Y     V+ AR++FD+    D V+   M++GY  +  ++    +F+ +
Sbjct: 382 LDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL 441

Query: 186 RVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
               +  N VT A +L  CA  A + LG +LHG ++++G      V + ++ MY+KC
Sbjct: 442 LQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 498



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/114 (32%), Positives = 62/114 (54%)
 Frame = +3

Query: 15  FVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMRVT 194
           +VGS+++ MYA    +D A + F  I  KD V WN M+   +++ K +E   LF++M + 
Sbjct: 486 YVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 545

Query: 195 EVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
             + + V+ +  LS CA    +  G ++H  ++R  F S     + L+ MYSKC
Sbjct: 546 GTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKC 599


>emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/118 (62%), Positives = 89/118 (75%)
 Frame = +3

Query: 3   ELDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKR 182
           ELD+FVGSSLIK Y++N  + DAR LFD++P KD VLWNVMLNGY K+   D   G+F  
Sbjct: 179 ELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFME 238

Query: 183 MRVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
           MR TE   N VTFAC+LSVCA++ +I  G+QLHGLVV SG +  S VANTLLAMY+KC
Sbjct: 239 MRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKC 296



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/119 (33%), Positives = 68/119 (57%)
 Frame = +3

Query: 3   ELDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKR 182
           E+D  V ++L+ MYA   ++ DARRLFD +P  D V WN M++GY ++   DE   LF  
Sbjct: 280 EMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHE 339

Query: 183 MRVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKCR 359
           M    ++ + +TF+  L + +  A +  G ++H  ++R+G      + + L+ +Y KCR
Sbjct: 340 MISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR 398



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/114 (32%), Positives = 62/114 (54%)
 Frame = +3

Query: 15  FVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRMRVT 194
           +VGS+++ MYA    +D A + F  I  KD V WN M+   +++ K +E   LF++M + 
Sbjct: 486 YVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 545

Query: 195 EVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
             + + V+ +  LS CA    +  G ++H  ++R  F S     + L+ MYSKC
Sbjct: 546 GTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKC 599



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/117 (30%), Positives = 65/117 (55%)
 Frame = +3

Query: 6   LDLFVGSSLIKMYADNDYVDDARRLFDKIPVKDCVLWNVMLNGYAKSVKSDETFGLFKRM 185
           LD+F+ S+LI +Y     V+ A ++FD+    D V+   M++GY  +  ++    +F+ +
Sbjct: 382 LDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL 441

Query: 186 RVTEVETNYVTFACILSVCATKALIELGTQLHGLVVRSGFDSYSQVANTLLAMYSKC 356
               +  N VT A +L  CA  A + LG +LHG ++++G      V + ++ MY+KC
Sbjct: 442 LQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 498