BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033193
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   199   1e-49
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   196   2e-48
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44

>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  199 bits (507), Expect = 1e-49
 Identities = 97/144 (67%), Positives = 114/144 (79%)
 Frame = +3

Query: 3   FTYPSVLKACGNELDLGFGREVHKCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           FTYPSVLKACG ELDLGFG+EVH+ I+ S ++W L V NAL++MY KCG++ +AR LFDK
Sbjct: 276 FTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDK 335

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKG 362
           +P RD VSWNSM+S YAS GMW  AFELFG M  E +IE+N I WNTIAGG L T NYKG
Sbjct: 336 IPERDAVSWNSMISVYASMGMWNEAFELFGSMWAE-DIELNIIIWNTIAGGYLRTGNYKG 394

Query: 363 ALELISQMRYHGVDLDSVTIVIGL 434
           ALEL+SQMR  G  LDSV ++IGL
Sbjct: 395 ALELLSQMRKXGSHLDSVALIIGL 418



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
 Frame = +3

Query: 6   TYPSVLKACGNELDLGFGREVHKCIDG-SDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           T  SVL  C    +L  G+E H  +    D +  L + NALV MY + G++  AR +FD 
Sbjct: 514 TIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDM 573

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKG 362
           +  RD +++ SM++GY  +G  + A +LF  M     I+ + IT   +   C  +     
Sbjct: 574 LGERDKMTYTSMIAGYGMQGEGQAALKLFEEMN-NFQIKPDHITMIAVLSACSHSGLVTQ 632

Query: 363 ALELISQMR 389
              L  +MR
Sbjct: 633 GQLLFEKMR 641



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/117 (33%), Positives = 58/117 (49%)
 Frame = +3

Query: 21  LKACGNELDLGFGREVHKCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDKMPVRDV 200
           L AC +  D   G+E+H     S       V+N+L+TMY +C +L+ A  LF  M  + +
Sbjct: 418 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSL 477

Query: 201 VSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKGALE 371
           +SWNS++SG       E A  L   M + S IE N +T  ++   C   AN +   E
Sbjct: 478 ISWNSIISGCCHMDRSEEASFLLREMLL-SGIEPNYVTIASVLPLCARVANLQHGKE 533


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  199 bits (505), Expect = 3e-49
 Identities = 97/144 (67%), Positives = 114/144 (79%)
 Frame = +3

Query: 3   FTYPSVLKACGNELDLGFGREVHKCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           FTYPSVLKACG ELDLGFG+EVH+ I+ S ++W L V NAL++MY KCG++ +AR LFDK
Sbjct: 202 FTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDK 261

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKG 362
           +P RD VSWNSM+S YAS GMW  AFELFG M  E +IE+N I WNTIAGG L T NYKG
Sbjct: 262 IPERDAVSWNSMISVYASMGMWNEAFELFGSMWAE-DIELNIIIWNTIAGGYLRTGNYKG 320

Query: 363 ALELISQMRYHGVDLDSVTIVIGL 434
           ALEL+SQMR  G  LDSV ++IGL
Sbjct: 321 ALELLSQMRKCGSHLDSVALIIGL 344



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
 Frame = +3

Query: 6   TYPSVLKACGNELDLGFGREVHKCIDG-SDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           T  SVL  C    +L  G+E H  +    D +  L + NALV MY + G++  AR +FD 
Sbjct: 440 TIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDM 499

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKG 362
           +  RD +++ SM++GY  +G  + A +LF  M     I+ + IT   +   C  +     
Sbjct: 500 LGERDKMTYTSMIAGYGMQGEGQAALKLFEEMN-NFQIKPDHITMIAVLSACSHSGLVTQ 558

Query: 363 ALELISQMR 389
              L  +MR
Sbjct: 559 GQLLFEKMR 567



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/117 (32%), Positives = 57/117 (48%)
 Frame = +3

Query: 21  LKACGNELDLGFGREVHKCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDKMPVRDV 200
           L AC +  D   G+E+H     S       V+NAL+TMY +C +L+ A  LF  M  + +
Sbjct: 344 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSL 403

Query: 201 VSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKGALE 371
           ++WNS++SG       E A  L   M +   IE N +T  ++   C   AN +   E
Sbjct: 404 ITWNSIISGCCHMDRSEEASFLLREMLL-FGIEPNYVTIASVLPLCARVANLQHGKE 459


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  196 bits (497), Expect = 2e-48
 Identities = 91/144 (63%), Positives = 117/144 (81%)
 Frame = +3

Query: 3   FTYPSVLKACGNELDLGFGREVHKCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           FTYPSVLKACG +LD+ FG+++H  I+ S L W+LFV N+LV+MY K GEL  AR LF+ 
Sbjct: 195 FTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFEN 254

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKG 362
           M  RD VSWN+M+SGYASKGMW+ AFELFG+MR+E  IE+N ITWNTIAGGC+++ N++ 
Sbjct: 255 MLERDDVSWNTMISGYASKGMWKEAFELFGKMRVE-GIELNIITWNTIAGGCVQSGNFEE 313

Query: 363 ALELISQMRYHGVDLDSVTIVIGL 434
           ALEL+S MR +G+D+DSV  +IGL
Sbjct: 314 ALELLSHMRSYGIDMDSVATIIGL 337



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/117 (35%), Positives = 60/117 (51%)
 Frame = +3

Query: 21  LKACGNELDLGFGREVHKCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDKMPVRDV 200
           L AC +   +  GRE+H     S  +    V+NAL+TMY +C  L  A +LF     +++
Sbjct: 337 LGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNI 396

Query: 201 VSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKGALE 371
           ++WNSM+SGY      E A  LF  M + S IE N +T  +I   C   AN +   E
Sbjct: 397 ITWNSMLSGYTHMDRSEEASFLFREMLL-SGIEPNYVTIASILPLCARVANLQHGKE 452



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
 Frame = +3

Query: 6   TYPSVLKACGNELDLGFGREVHKCI-DGSDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           T  S+L  C    +L  G+E H  I   +  +  L + N+LV MY + G++  A+ LFD 
Sbjct: 433 TIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDS 492

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKG 362
           +  RD V++ S+++GY  +G    A +LF  M+ + +I+ + +T   +   C  +     
Sbjct: 493 ISRRDEVTYTSLIAGYGIQGEGREALKLFDEMK-KRHIKPDHVTMVAVLSACSHSGLVTE 551

Query: 363 ALELISQM 386
            ++L   M
Sbjct: 552 GIKLFELM 559


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/145 (61%), Positives = 115/145 (79%), Gaps = 1/145 (0%)
 Frame = +3

Query: 3   FTYPSVLKACGNELDLGFGREVHKCIDGS-DLEWDLFVQNALVTMYVKCGELEVARSLFD 179
           FTYPSVLKACG +LDL FGREVH+ I+ +    W+L+V N+LV+MY K GEL+ AR LF+
Sbjct: 143 FTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFN 202

Query: 180 KMPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYK 359
           +MP RD VSWN ++S YAS+G+W+ AFELF  MR+ +  E+N ITWNTIAGGC++T N+K
Sbjct: 203 QMPERDAVSWNGIISNYASRGLWKEAFELFEEMRL-AGAEVNIITWNTIAGGCVQTRNFK 261

Query: 360 GALELISQMRYHGVDLDSVTIVIGL 434
           GALEL+SQMR   +DLD V ++IGL
Sbjct: 262 GALELLSQMRRCDIDLDPVAMIIGL 286



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
 Frame = +3

Query: 21  LKACGNELDLGFGREVH-----KCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDKM 185
           L AC +   +  G  +H      C DG D      V+NAL+TMY +C +L  A  LF  +
Sbjct: 286 LGACSHIGAIKLGTVIHASAIRSCFDGFDN-----VRNALITMYSRCKDLRHADILFKSI 340

Query: 186 PVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKGA 365
             + + +WNSM+SGY      E A  LF  M + S IE N +T  +I   C   AN +  
Sbjct: 341 KTKSLTTWNSMLSGYTHMDRSEEASFLFREM-LFSGIEPNYVTIASILPHCARVANLQQG 399

Query: 366 LE 371
            E
Sbjct: 400 KE 401



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
 Frame = +3

Query: 6   TYPSVLKACGNELDLGFGREVHKCIDGSD-LEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           T  S+L  C    +L  G+E H  I   +  E  L + N+LV MY + G++  A+ +FD 
Sbjct: 382 TIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDS 441

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGC 338
           +  RD V++ S+++GY  +G  + A +LF  M I+  I+ + +T   +   C
Sbjct: 442 LRRRDKVTYTSLIAGYGIQGEGKTALKLFDEM-IKHRIKPDQVTMVAVLSAC 492


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/144 (59%), Positives = 112/144 (77%)
 Frame = +3

Query: 3   FTYPSVLKACGNELDLGFGREVHKCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           +TYPSVLKACG  LD   G EVH+ I+ S +EW LFV NALV+MY + G+LE+AR LFD 
Sbjct: 183 YTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDN 242

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKG 362
           MP RD VSWN+++S YAS+G+W+ AF+LFG M+ E  +EMN I WNTIAGGCL + N++G
Sbjct: 243 MPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQ-EEGVEMNVIIWNTIAGGCLHSGNFRG 301

Query: 363 ALELISQMRYHGVDLDSVTIVIGL 434
           AL+LISQMR   + LD++ +V+GL
Sbjct: 302 ALQLISQMR-TSIHLDAIAMVVGL 324



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
 Frame = +3

Query: 21  LKACGNELDLGFGREVH-----KCIDGSDLEWDLFVQNALVTMYVKCGELEVARSLFDKM 185
           L AC +   +  G+E+H      C D  D      V+NAL+TMY +C +L  A  LF + 
Sbjct: 324 LNACSHIGAIKLGKEIHGHAVRTCFDVFDN-----VKNALITMYSRCRDLGHAFILFHRT 378

Query: 186 PVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGCLETANYKGA 365
             + +++WN+M+SGYA    +E    LF  M ++  +E N +T  ++   C   AN +  
Sbjct: 379 EEKGLITWNAMLSGYAHMDRYEEVTFLFREM-LQEGMEPNYVTIASVLPLCARIANLQHG 437

Query: 366 LELISQMRYH 395
            E    +  H
Sbjct: 438 KEFHCYIMKH 447



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = +3

Query: 6   TYPSVLKACGNELDLGFGREVHKCI-DGSDLEWDLFVQNALVTMYVKCGELEVARSLFDK 182
           T  SVL  C    +L  G+E H  I      E  L + NALV MY + G +  AR +FD 
Sbjct: 420 TIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDS 479

Query: 183 MPVRDVVSWNSMVSGYASKGMWEYAFELFGRMRIESNIEMNTITWNTIAGGC 338
           +  RD V++ SM+ GY  KG  E   +LF  M  +  I+ + +T   +   C
Sbjct: 480 LTKRDEVTYTSMILGYGMKGEGETTLKLFEEM-CKLEIKPDHVTMVAVLTAC 530