BLASTX nr result

ID: Cimicifuga21_contig00033027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033027
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
emb|CBI29623.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242...    66   3e-09
emb|CAN80767.1| hypothetical protein VITISV_013864 [Vitis vinifera]    66   3e-09

>ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|222840649|gb|EEE78196.1|
            predicted protein [Populus trichocarpa]
          Length = 1241

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/118 (39%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
 Frame = +1

Query: 1    SISSRKQSPKTTEGDQSNSSWEVYAQKKKLDAEHMLRKLASSS----------------- 129
            S SSR+QS +TTE D S+ S E    K   DA++  R+ +S S                 
Sbjct: 829  SSSSRRQSSRTTEEDPSSVSKESNVYKPNSDAQYFPRRSSSPSSLYRAINGHSSHQGEYE 888

Query: 130  --VSSPQIVDEHRSTWGYPVC------KLDAIWDKCIERCHSKTLQQLLHAQGTLLSI 279
                 P+++D +    G  V       KLD IW+KCIE+CHS+TL+QLLHA G LLSI
Sbjct: 889  FNAKPPRLMDSNDEMTGNKVFRYKNSDKLDDIWEKCIEKCHSQTLRQLLHAHGKLLSI 946


>emb|CBI29623.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 28/119 (23%)
 Frame = +1

Query: 7    SSRKQSPKTTEGDQSNSSWEV-YAQKKKLDAEHMLRKLASSSVSSPQIVDEHRSTWG--- 174
            SSR+QS KTTE D S++S +     K+K +A HM RK + S +S P+  +++ +  G   
Sbjct: 681  SSRRQSSKTTEDDPSSASRDATIVHKQKPNAHHMPRK-SFSPISMPKSAEKNSTHQGDLF 739

Query: 175  ------------------------YPVCKLDAIWDKCIERCHSKTLQQLLHAQGTLLSI 279
                                        KLD IW++CIERCHSKTL+QLLHA G L+SI
Sbjct: 740  QFRNSGASASSHDDVMMGNLVFRSINADKLDDIWERCIERCHSKTLRQLLHAHGKLVSI 798


>ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|222839109|gb|EEE77460.1|
            predicted protein [Populus trichocarpa]
          Length = 1197

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 34/127 (26%)
 Frame = +1

Query: 1    SISSRKQSPKTTEGDQSNSSWEVYAQKKKLDAEHMLRK---------------------- 114
            S SSR+QS +TTE D S++S E    K K +A+++ ++                      
Sbjct: 836  SSSSRRQSSRTTEEDPSSASKESKVYKTKSNAQYLTQRSSSPPSLYREINGCSSQQGEFG 895

Query: 115  ---------LASSSVSSPQIVDEHRSTWGYPVC---KLDAIWDKCIERCHSKTLQQLLHA 258
                     L +S  SS  + DE      +      KLD IW+KCIE+CHS+TL+QLLHA
Sbjct: 896  FNAKAPRSRLVNSRTSSTSLDDEITGNMIFRYKNSEKLDDIWEKCIEKCHSQTLRQLLHA 955

Query: 259  QGTLLSI 279
             G LLSI
Sbjct: 956  HGKLLSI 962


>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
          Length = 1274

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 43/134 (32%)
 Frame = +1

Query: 7    SSRKQSPKTTEGDQSNSSWEV-YAQKKKLDAEHMLRKLASSSVSSPQIVDEHRSTWG--- 174
            SSR+QS KTTE D S++S +     K+K +A HM RK + S +S P+  +++ +  G   
Sbjct: 807  SSRRQSSKTTEDDPSSASRDATIVHKQKPNAHHMPRK-SFSPISMPKSAEKNSTHQGDLL 865

Query: 175  ----------YPVC-----------------------------KLDAIWDKCIERCHSKT 237
                       PV                              KLD IW++CIERCHSKT
Sbjct: 866  SLVDGFNFNAKPVHSQFRNSGASASSHDDVMMGNLVFRSINADKLDDIWERCIERCHSKT 925

Query: 238  LQQLLHAQGTLLSI 279
            L+QLLHA G L+SI
Sbjct: 926  LRQLLHAHGKLVSI 939


>emb|CAN80767.1| hypothetical protein VITISV_013864 [Vitis vinifera]
          Length = 545

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 43/134 (32%)
 Frame = +1

Query: 7   SSRKQSPKTTEGDQSNSSWEV-YAQKKKLDAEHMLRKLASSSVSSPQIVDEHRSTWG--- 174
           SSR+QS KTTE D S++S +     K+K +A HM RK + S +S P+  +++ +  G   
Sbjct: 47  SSRRQSSKTTEDDPSSASRDATIIHKQKPNAHHMPRK-SFSPISMPKSAEKNSTHQGDLL 105

Query: 175 ----------YPVC-----------------------------KLDAIWDKCIERCHSKT 237
                      PV                              KLD IW++CIERCHSKT
Sbjct: 106 SLVDGFNFNAKPVHSQFRNSGASASSHDDVMMGNLVFRSINADKLDDIWERCIERCHSKT 165

Query: 238 LQQLLHAQGTLLSI 279
           L+QLLHA G L+SI
Sbjct: 166 LRQLLHAHGKLVSI 179


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