BLASTX nr result

ID: Cimicifuga21_contig00032982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032982
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28441.3| unnamed protein product [Vitis vinifera]              133   1e-29
emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]   133   1e-29
ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ...   123   2e-26
gb|EEC70990.1| hypothetical protein OsI_02646 [Oryza sativa Indi...   122   4e-26

>emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/68 (89%), Positives = 63/68 (92%)
 Frame = -1

Query: 451  HSEKLAVAFVLIHTSGLPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSHRFHHFVDG 272
            HSEK+AVAFVL   S LPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDS+RFHHF DG
Sbjct: 846  HSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDG 905

Query: 271  KCSCGDYW 248
            KCSCGDYW
Sbjct: 906  KCSCGDYW 913


>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/68 (89%), Positives = 63/68 (92%)
 Frame = -1

Query: 451  HSEKLAVAFVLIHTSGLPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSHRFHHFVDG 272
            HSEK+AVAFVL   S LPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDS+RFHHF DG
Sbjct: 1472 HSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDG 1531

Query: 271  KCSCGDYW 248
            KCSCGDYW
Sbjct: 1532 KCSCGDYW 1539


>ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|222837227|gb|EEE75606.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/68 (85%), Positives = 60/68 (88%)
 Frame = -1

Query: 451 HSEKLAVAFVLIHTSGLPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSHRFHHFVDG 272
           HSEKLAVAFVL   SGLPIRIMKNLRVCGDCHSAF YISK+V R IVLRDS+RFHHF DG
Sbjct: 714 HSEKLAVAFVLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDG 773

Query: 271 KCSCGDYW 248
           KCSC DYW
Sbjct: 774 KCSCRDYW 781


>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355510273|gb|AES91415.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/68 (82%), Positives = 60/68 (88%)
 Frame = -1

Query: 451  HSEKLAVAFVLIHTSGLPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSHRFHHFVDG 272
            HSEKLA+AFVL   S LPIRIMKNLRVCGDCH+AF YISKIVGRQI+LRDS+RFHHF  G
Sbjct: 1067 HSEKLAIAFVLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGG 1126

Query: 271  KCSCGDYW 248
             CSCGDYW
Sbjct: 1127 MCSCGDYW 1134


>gb|EEC70990.1| hypothetical protein OsI_02646 [Oryza sativa Indica Group]
          Length = 952

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/69 (84%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
 Frame = -1

Query: 451  HSEKLAVAFVLIHTS-GLPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSHRFHHFVD 275
            HSEKLAVAFVL  +S G PIRIMKNLRVCGDCH+AF YIS+IVGRQI+LRDS RFHHF D
Sbjct: 884  HSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKD 943

Query: 274  GKCSCGDYW 248
            GKCSCGDYW
Sbjct: 944  GKCSCGDYW 952


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