BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032283
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 65   2e-15
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]    61   1e-14
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    61   4e-14
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    64   4e-14
emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera]    52   4e-14

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +3

Query: 135  LGNLHYFLGLEIHRNSNGIFLSQAKYALDLLNKFDMASAKPVPTPSST 278
            LG+++YFLG+E+H++  G+ L QAKYALDLL K DM  AKP  TP ST
Sbjct: 1371 LGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDMLGAKPCATPVST 1418



 Score = 41.6 bits (96), Expect(2) = 2e-15
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = +2

Query: 2    DHSLFTKFSHNVTTYILVYVDDIIVTGSSLPYINCLIQTLGQSFP 136
            D SLF K   ++T +ILVYVDDII+TGSS+     +I  L   FP
Sbjct: 1324 DTSLFIKRDTSIT-FILVYVDDIIITGSSVTECQSIISQLQTMFP 1367


>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score = 60.8 bits (146), Expect(2) = 1e-14
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 135 LGNLHYFLGLEIHRNSNGIFLSQAKYALDLLNKFDMASAKPVPTPSST 278
           LG L YFLG+E+  ++NG+FLSQ KY  DLLN+  M  AKP PTP +T
Sbjct: 181 LGPLTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHMTEAKPAPTPLAT 228



 Score = 43.5 bits (101), Expect(2) = 1e-14
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = +2

Query: 2   DHSLFTKFSHNVTTYILVYVDDIIVTGSSLPYINCLIQTLGQSF 133
           D SLF   +H+   Y+LVYVDDII+TG+++      IQ L Q F
Sbjct: 133 DTSLFIFNNHDTILYLLVYVDDIIITGNNVEAAQTFIQQLSQRF 176


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 60.8 bits (146), Expect(2) = 4e-14
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +3

Query: 135  LGNLHYFLGLEIHRNSNGIFLSQAKYALDLLNKFDMASAKPVPTPSST 278
            LG+LHYFLG+E+HR  +G+ L Q KYA DLL +  M   KPV TP +T
Sbjct: 1148 LGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVAT 1195



 Score = 41.6 bits (96), Expect(2) = 4e-14
 Identities = 22/44 (50%), Positives = 28/44 (63%)
 Frame = +2

Query: 2    DHSLFTKFSHNVTTYILVYVDDIIVTGSSLPYINCLIQTLGQSF 133
            D SLF   +H+   YILVYVDDII+TGSS   I+ ++  L   F
Sbjct: 1100 DVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVLAKLKDDF 1143


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 64.3 bits (155), Expect(2) = 4e-14
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = +3

Query: 135  LGNLHYFLGLEIHRNSNGIFLSQAKYALDLLNKFDMASAKPVPTP 269
            LG+LHYFLG+E+  N  G+FLSQ KYALDLL +  M  AKP+ TP
Sbjct: 1063 LGDLHYFLGVEVQANEKGLFLSQTKYALDLLQRASMIDAKPISTP 1107



 Score = 38.1 bits (87), Expect(2) = 4e-14
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 2    DHSLFTKFSHNVTTYILVYVDDIIVTGSSLPYINCLIQTLGQSF 133
            D SLF   S   T Y+L+YVDD+I+TGS+   ++  I  L   F
Sbjct: 1015 DSSLFFYHSSLGTVYLLLYVDDMIITGSTPSLVHTFITRLSNEF 1058


>emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera]
          Length = 1352

 Score = 52.0 bits (123), Expect(2) = 4e-14
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = +3

Query: 135 LGNLHYFLGLEIHRNSNGIFLSQAKYALDLLNKFDMASAKPVPTPSST 278
           +G+LHYFLG+E+     G+FLSQ +Y  DLL++  M +AK   TP ST
Sbjct: 125 MGSLHYFLGIEVIPTPQGLFLSQHQYIRDLLSRTSMENAKETLTPMST 172



 Score = 50.4 bits (119), Expect(2) = 4e-14
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +2

Query: 2   DHSLFTKFSHNVTTYILVYVDDIIVTGSSLPYINCLIQTLGQSF 133
           D+SLF   SH++  Y LVYVDDIIVT ++L ++N +I  LG +F
Sbjct: 77  DNSLFIYKSHDILCYCLVYVDDIIVTSNTLSFVNNIINKLGSTF 120