BLASTX nr result

ID: Cimicifuga21_contig00032131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032131
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31232.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002337003.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding prote...    94   2e-17
ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222...    94   2e-17

>emb|CBI31232.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/97 (55%), Positives = 66/97 (68%)
 Frame = -2

Query: 299 LSSLSKDGIQEDSCCLYKNLLQDLTSKEGLSIPAYTTMKSGASHVPTFTSTVHVEGDVFH 120
           L SLS  G QED   +YKNLLQ++  KEG  +P Y+T KSG SH+PTF STV +EG+ F 
Sbjct: 222 LMSLSPAGFQEDDYGVYKNLLQEMARKEGYQLPVYSTEKSGVSHMPTFLSTVEIEGETFV 281

Query: 119 GVEAKTKKQAEKNAAKVAYFSLKKRQLSRMPKLLFQS 9
           G +AKTKK AE NAAK AY  LK+R+ +   K L  S
Sbjct: 282 GQKAKTKKLAEMNAAKAAYTHLKERRSNLNHKSLSPS 318


>ref|XP_002337003.1| predicted protein [Populus trichocarpa] gi|222837556|gb|EEE75921.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/97 (51%), Positives = 67/97 (69%)
 Frame = -2

Query: 299 LSSLSKDGIQEDSCCLYKNLLQDLTSKEGLSIPAYTTMKSGASHVPTFTSTVHVEGDVFH 120
           L SL  +G++ED    YK+LLQ+L  +EG  +P Y T KSG +HVPTF S V +EG++F 
Sbjct: 68  LMSLLSNGVEEDGFG-YKSLLQELAQREGCGLPTYWTDKSGEAHVPTFVSKVEIEGEIFT 126

Query: 119 GVEAKTKKQAEKNAAKVAYFSLKKRQLSRMPKLLFQS 9
           G  AKTKKQAE +AAK+AY +L++R  S+ P  L  S
Sbjct: 127 GQGAKTKKQAEMSAAKIAYTALQQRYSSQSPGFLSTS 163


>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
 Frame = -2

Query: 299 LSSLSKDGIQEDSCCL-----YKNLLQDLTSKEGLSIPAYTTMKSGASHVPTFTSTVHVE 135
           L SL  +G++E S        YKNLLQ+L  +EG  +P Y+T KSG +HVPTF STV +E
Sbjct: 151 LMSLLPNGVEEVSFLFMDESGYKNLLQELAQREGCGLPTYSTNKSGEAHVPTFISTVEIE 210

Query: 134 GDVFHGVEAKTKKQAEKNAAKVAYFSLKKR 45
           G++F G  AKTKKQAE +AAK AY +LK+R
Sbjct: 211 GEIFTGQGAKTKKQAEMSAAKTAYTALKQR 240


>ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding protein 4-like [Cucumis
           sativus]
          Length = 247

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = -2

Query: 299 LSSLSKDGIQEDSCC-LYKNLLQDLTSKEGLSIPAYTTMKSGASHVPTFTSTVHVEGDVF 123
           L SL +DG QEDS   LYKNLLQ++  K GL +PAY+T +SG  HVP F STV V  + F
Sbjct: 68  LMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENF 127

Query: 122 HGVEAKTKKQAEKNAAKVAYFSLKK 48
            G  ++TKKQAE +AAKVAYF++K+
Sbjct: 128 EGKPSRTKKQAEMSAAKVAYFTIKE 152


>ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222879 [Cucumis sativus]
          Length = 446

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = -2

Query: 299 LSSLSKDGIQEDSCC-LYKNLLQDLTSKEGLSIPAYTTMKSGASHVPTFTSTVHVEGDVF 123
           L SL +DG QEDS   LYKNLLQ++  K GL +PAY+T +SG  HVP F STV V  + F
Sbjct: 267 LMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENF 326

Query: 122 HGVEAKTKKQAEKNAAKVAYFSLKK 48
            G  ++TKKQAE +AAKVAYF++K+
Sbjct: 327 EGKPSRTKKQAEMSAAKVAYFTIKE 351


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