BLASTX nr result

ID: Cimicifuga21_contig00031475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031475
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315385.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002315385.1| predicted protein [Populus trichocarpa] gi|222864425|gb|EEF01556.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   VAALVLISIGVLPVRVTGVAIIVLSIMFVIIGTLCYLYLAAVWMFSMVMSITGMDLNELM 182
           V A+VLI +  L +     AI +      I+  L YLYL A W  ++V+S+   D     
Sbjct: 140 VLAIVLIKLVSL-LDPNSYAIYLWGWFLTILAALFYLYLDASWTLALVISVLENDSCGTK 198

Query: 183 VVEKCEELSAQRMLQGFVLMLFMSFVSVAIVV---TSALIGMEETNQGMDTRSADQVMML 353
            +++ E+L   R +QGF+LM  ++ + V I V    +A    ++   G   + A + +  
Sbjct: 199 GLKRSEKLIRGRKIQGFLLMFILTALVVPIYVLLYVTATDDDDDDELGPFAQFAFRFVAT 258

Query: 354 CYVCLLKLFMFLLYSVYYY 410
              CL K F+ ++++V+YY
Sbjct: 259 VLFCLSKFFVSVVFTVFYY 277


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