BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031473
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]           60   1e-11
ref|XP_002267854.2| PREDICTED: splicing factor U2af large subuni...    60   1e-11
ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG4...    57   4e-11
gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| sp...    57   4e-11
tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea m...    57   4e-11

>gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 506

 Score = 60.5 bits (145), Expect(2) = 1e-11
 Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
 Frame = -1

Query: 306 QATRHARRIYVCGLPSLTNNKAIEMLFNNYI-----KSSGDSGAVVDVYVD-QKNFAIVE 145
           QATRHARR+YV GLPS  N +++   F++ +      ++G   AV+DVY++ +K FA VE
Sbjct: 168 QATRHARRVYVGGLPSSANEQSVATFFSHVMYAIGGNTAGPGDAVIDVYINHEKKFAFVE 227

Query: 144 FSSVEEA 124
             SVEEA
Sbjct: 228 MRSVEEA 234



 Score = 33.9 bits (76), Expect(2) = 1e-11
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -2

Query: 131 KKQKNAIELGAVSFEGEQLKICRPTDYNRAL 39
           ++  NA+ L  V FEGE +++ RP+DYN +L
Sbjct: 232 EEASNAMALDGVIFEGEPVRVRRPSDYNASL 262


>ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 410

 Score = 60.1 bits (144), Expect(2) = 1e-11
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
 Frame = -1

Query: 306 QATRHARRIYVCGLPSLTNNKAIEMLFNNYI-----KSSGDSGAVVDVYVD-QKNFAIVE 145
           QATRHARR+YV GLP L N + I   F+  +      S+G   AVV+VY++ +K FA VE
Sbjct: 101 QATRHARRVYVGGLPPLANEQTIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 160

Query: 144 FSSVEEA 124
             SVEEA
Sbjct: 161 MRSVEEA 167



 Score = 33.9 bits (76), Expect(2) = 1e-11
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 131 KKQKNAIELGAVSFEGEQLKICRPTDYNRALDLAQSNTQ 15
           ++  NA+ L  + FEG  +++ RPTDYN +L  A   +Q
Sbjct: 165 EEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQ 203


>ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG47517.1| splicing factor
           U2AF 65 kDa subunit [Zea mays]
          Length = 596

 Score = 57.4 bits (137), Expect(2) = 4e-11
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
 Frame = -1

Query: 306 QATRHARRIYVCGLPSLTNNKAIEMLFNNYI-----KSSGDSGAVVDVYVD-QKNFAIVE 145
           QATRHARR+YV GLP   N + + + FN  +      ++G   AV++VY++  K FA VE
Sbjct: 256 QATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 315

Query: 144 FSSVEEA 124
             SVEEA
Sbjct: 316 MRSVEEA 322



 Score = 35.0 bits (79), Expect(2) = 4e-11
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -2

Query: 131 KKQKNAIELGAVSFEGEQLKICRPTDYNRALDLAQSNTQ 15
           ++  NA+ L  + FEG  +K+ RPTDYN +L  A   +Q
Sbjct: 320 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQ 358


>gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| splicing factor U2AF
           subunit [Zea mays]
          Length = 594

 Score = 57.4 bits (137), Expect(2) = 4e-11
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
 Frame = -1

Query: 306 QATRHARRIYVCGLPSLTNNKAIEMLFNNYI-----KSSGDSGAVVDVYVD-QKNFAIVE 145
           QATRHARR+YV GLP   N + + + FN  +      ++G   AV++VY++  K FA VE
Sbjct: 254 QATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 313

Query: 144 FSSVEEA 124
             SVEEA
Sbjct: 314 MRSVEEA 320



 Score = 35.0 bits (79), Expect(2) = 4e-11
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -2

Query: 131 KKQKNAIELGAVSFEGEQLKICRPTDYNRALDLAQSNTQ 15
           ++  NA+ L  + FEG  +K+ RPTDYN +L  A   +Q
Sbjct: 318 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQ 356


>tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
          Length = 590

 Score = 57.4 bits (137), Expect(2) = 4e-11
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
 Frame = -1

Query: 306 QATRHARRIYVCGLPSLTNNKAIEMLFNNYI-----KSSGDSGAVVDVYVD-QKNFAIVE 145
           QATRHARR+YV GLP   N + + + FN  +      ++G   AV++VY++  K FA VE
Sbjct: 250 QATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 309

Query: 144 FSSVEEA 124
             SVEEA
Sbjct: 310 MRSVEEA 316



 Score = 35.0 bits (79), Expect(2) = 4e-11
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -2

Query: 131 KKQKNAIELGAVSFEGEQLKICRPTDYNRALDLAQSNTQ 15
           ++  NA+ L  + FEG  +KI RPTDYN +L  A   +Q
Sbjct: 314 EEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQ 352