BLASTX nr result
ID: Cimicifuga21_contig00031423
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00031423
(642 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249... 129 5e-28
emb|CBI18100.3| unnamed protein product [Vitis vinifera] 115 5e-24
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2... 92 8e-17
ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thali... 87 3e-15
ref|XP_002882584.1| binding protein [Arabidopsis lyrata subsp. l... 85 1e-14
>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
Length = 1007
Score = 129 bits (324), Expect = 5e-28
Identities = 85/211 (40%), Positives = 123/211 (58%), Gaps = 1/211 (0%)
Frame = -2
Query: 641 AILVLAIAASLTNEQCLCSIPSRIFTYAIPFLGRISYSLRDVISQDNLFACLSHWSSFMH 462
A+LVLAI+A L+ Q +CSIPSRIF+YA+ LGRIS++L+DV++Q+ L A LSH S
Sbjct: 497 ALLVLAISAPLSEAQKVCSIPSRIFSYAVTLLGRISHALKDVMNQNTLLAYLSHCSK--- 553
Query: 461 SPIAEIFRHEEHHF-SIKGDIPNDNDKEILKKVGPLHQISYGDSKKLYHDNFWDPRHTMS 285
+ I + E F I+GDIPN + +++ G Q +++ + +PR + +
Sbjct: 554 ---STIVDNSESFFPMIEGDIPNCSCIDMISPAGMSLQQGASENE---NQKRLEPRKS-A 606
Query: 284 VPEYQQRLASMQKEETDAIGLVLRTVGEIWPLIKLGCTDEVRRTLRSCKEELTTTSAESN 105
P +L + E +I L+L + +IW L++ GC EV R LRS +EEL T ++S
Sbjct: 607 TPLLDCQL-EVHSEVAKSIKLILLKINDIWFLVQKGCMAEVLRMLRSFREELATYMSDSL 665
Query: 104 GCVGLLDFACQYVRVVGLLGKVWEQVFSPRK 12
L F QY+RVV LL KVWE PRK
Sbjct: 666 VSADTLAFTFQYLRVVKLLAKVWEHFLPPRK 696
>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 115 bits (289), Expect = 5e-24
Identities = 79/201 (39%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Frame = -2
Query: 641 AILVLAIAASLTNEQCLCSIPSRIFTYAIPFLGRISYSLRDVISQDNLFACLSHWSSFMH 462
A+LVLAI+A L+ Q +CSIPSRIF+YA+ LGRIS++L+DV++Q+ L A LSH S
Sbjct: 497 ALLVLAISAPLSEAQKVCSIPSRIFSYAVTLLGRISHALKDVMNQNTLLAYLSHCSK--- 553
Query: 461 SPIAEIFRHEEHHF-SIKGDIPNDNDKEILKKVGPLHQISYGDSKKLYHDNFWDPRHTMS 285
+ I + E F I+GDIPN + +++ G Q +++ + +PR + +
Sbjct: 554 ---STIVDNSESFFPMIEGDIPNCSCIDMISPAGMSLQQGASENE---NQKRLEPRKS-A 606
Query: 284 VPEYQQRLASMQKEETDAIGLVLRTVGEIWPLIKLGCTDEVRRTLRSCKEELTTTSAESN 105
P +L + E +I L+L + +IW L++ GC EV R LRS +EEL T ++S
Sbjct: 607 TPLLDCQL-EVHSEVAKSIKLILLKINDIWFLVQKGCMAEVLRMLRSFREELATYMSDSL 665
Query: 104 GCVGLLDFACQYVRVVGLLGK 42
L F QY+RVV LL K
Sbjct: 666 VSADTLAFTFQYLRVVKLLAK 686
>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
predicted protein [Populus trichocarpa]
Length = 949
Score = 92.0 bits (227), Expect = 8e-17
Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 7/212 (3%)
Frame = -2
Query: 641 AILVLAIAASLTNEQCLCSIPSRIFTYAIPFLGRISYSLRDVISQDNLFACLSHWSSFMH 462
A LVLAI+A L+ Q +IP R+F+YA+ LGRIS +LR+V+ QD L A LS S
Sbjct: 483 AFLVLAISAPLSQNQNGQNIPPRLFSYAVTLLGRISSALREVVDQDTLLAYLSRCS---R 539
Query: 461 SPIAEIFRHEEHHFSIKGD-IPNDNDKEILKKVG-PLHQISYGDSKKLYHDNFWDPRHTM 288
S E + D + + K++ VG P+ Q SK P +
Sbjct: 540 SSTRGTEVEESSLLPVVDDAVLTHSRKDVNNPVGVPMLQTGNETSKV-------QPVISC 592
Query: 287 SVPEYQQRLASMQKEETD----AIGLVLRTVGEIWPLIKLGCTDEVRRTLR-SCKEELTT 123
+ + + Q +E D ++ L+L V + W L++ CT+ R LR CK EL
Sbjct: 593 ELEDLATSIVECQADELDEVMKSVNLILARVRDAWLLVQSRCTNVAVRALRLDCKRELAV 652
Query: 122 TSAESNGCVGLLDFACQYVRVVGLLGKVWEQV 27
++ S G+L F QY++V+ L K+WE V
Sbjct: 653 LTSASLESAGILAFTMQYLQVMKLFAKIWEHV 684
>ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thaliana]
gi|17473697|gb|AAL38305.1| unknown protein [Arabidopsis
thaliana] gi|332641160|gb|AEE74681.1| integrator complex
subunit 4 [Arabidopsis thaliana]
Length = 936
Score = 86.7 bits (213), Expect = 3e-15
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Frame = -2
Query: 641 AILVLAIAASLTNEQCLCSIPSRIFTYAIPFLGRISYSLRDVISQDNLFACLSHWSSFMH 462
A L L I+A L+N+Q + SIP F+Y++ LG+ S L D++ QD L A L+H +
Sbjct: 486 ASLTLIISAPLSNKQSITSIPPLAFSYSLAMLGKFSSGLHDMMDQDMLLAYLTHCAILSS 545
Query: 461 SPIAEIFRHEEHHFSIKGDIPNDNDKEILKKVGPLHQISYGDSKKLYHDN--FWDPRHTM 288
S E KGD+ H +Y DS N +
Sbjct: 546 SSGTEFN---------KGDVF-------------FH--AYRDSNADLAGNPVLLPGKDIP 581
Query: 287 SVPEYQQRLASMQ--KEETDAIGLVLRTVGEIWPLIKLGCTDEVRRTLRSCKEELTTTSA 114
+ +Y A ++ + + +L + W L + GC+ E R LR+CK+EL T +A
Sbjct: 582 AESKYMACKAELEIGNQALKFVNHILLKIKAAWLLSQSGCSKEALRALRACKQELATLTA 641
Query: 113 ESNGCVGLLDFACQYVRVVGLLGKVW 36
+S+ G LDF CQYV V+ LL +VW
Sbjct: 642 DSSISKGTLDFICQYVHVIELLVQVW 667
>ref|XP_002882584.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297328424|gb|EFH58843.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 932
Score = 84.7 bits (208), Expect = 1e-14
Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Frame = -2
Query: 641 AILVLAIAASLTNEQCLCSIPSRIFTYAIPFLGRISYSLRDVISQDNLFACLSHWSSFMH 462
A L+L I+A L+N+Q + SIP F+Y++ LG+ S L D++ Q L A L+H +
Sbjct: 482 ASLMLIISAPLSNKQSITSIPPLAFSYSLAMLGKFSSGLHDMMDQYMLLAYLTHCAILSS 541
Query: 461 SPIAEIFRHEEHHFSIKGDIPNDNDKEILKKVGPLHQISYGDSKKLYHDNFWDP--RHTM 288
S E KGDI +Y DS D +P +
Sbjct: 542 SSGTEFN---------KGDIFFQ---------------AYRDSNA---DLSGNPVLLPSK 574
Query: 287 SVPEYQQRLASMQKEETDAIGL-----VLRTVGEIWPLIKLGCTDEVRRTLRSCKEELTT 123
+P + +AS + E L +L + W L + GC+ E R LR+CK+EL T
Sbjct: 575 DIPAESKYMASKAELEIGNQALKFLNHILLKIKAAWLLSQSGCSKEALRALRACKQELAT 634
Query: 122 TSAESNGCVGLLDFACQYVRVVGLLGKVW 36
+A+S+ G L+F CQYV V+ LL +VW
Sbjct: 635 LTADSSISNGTLEFICQYVHVIELLAQVW 663