BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031421
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26532.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat...   162   3e-38
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]   162   3e-38
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat...   160   1e-37
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   158   4e-37

>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  162 bits (410), Expect = 3e-38
 Identities = 70/120 (58%), Positives = 96/120 (80%)
 Frame = -1

Query: 374 LDLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERH 195
           LD+VSYNT++N+YC+ GKLE  + L+DE+E+ G+E D+YTHTIL+DG+C+ G+++GA RH
Sbjct: 269 LDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRH 328

Query: 194 LKHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQKDDFTYSMMVHGLCKARLF 15
           LK+M   GF S LVA NC+I GLC +GQ++ A+++F  ME KD FTYS MVH LCKAR +
Sbjct: 329 LKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRY 388


>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  162 bits (410), Expect = 3e-38
 Identities = 70/120 (58%), Positives = 96/120 (80%)
 Frame = -1

Query: 374 LDLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERH 195
           LD+VSYNT++N+YC+ GKLE  + L+DE+E+ G+E D+YTHTIL+DG+C+ G+++GA RH
Sbjct: 285 LDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRH 344

Query: 194 LKHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQKDDFTYSMMVHGLCKARLF 15
           LK+M   GF S LVA NC+I GLC +GQ++ A+++F  ME KD FTYS MVH LCKAR +
Sbjct: 345 LKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRY 404



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           D+ SYN+L++ + K GK + A  +  ++  + +     T  I+++G+C  G    A    
Sbjct: 111 DVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLY 170

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQK----DDFTYSMMVHGLCKA 24
           ++++ +GF   LV  N LI+GLC   ++  A R+  ++ +     D  TY+ ++    ++
Sbjct: 171 RYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRS 230

Query: 23  RLF 15
           R F
Sbjct: 231 RQF 233


>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
          Length = 457

 Score =  162 bits (410), Expect = 3e-38
 Identities = 70/120 (58%), Positives = 96/120 (80%)
 Frame = -1

Query: 374 LDLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERH 195
           LD+VSYNT++N+YC+ GKLE  + L+DE+E+ G+E D+YTHTIL+DG+C+ G+++GA RH
Sbjct: 285 LDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRH 344

Query: 194 LKHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQKDDFTYSMMVHGLCKARLF 15
           LK+M   GF S LVA NC+I GLC +GQ++ A+++F  ME KD FTYS MVH LCKAR +
Sbjct: 345 LKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRY 404



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           D+ SYN+L++ + K GK + A  +  ++  + +     T  I+++G+C  G    A    
Sbjct: 111 DVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLY 170

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQK----DDFTYSMMVHGLCKA 24
           ++++ +GF   LV  N LI+GLC   ++  A R+  ++ +     D  TY+ ++    ++
Sbjct: 171 RYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRS 230

Query: 23  RLF 15
           R F
Sbjct: 231 RQF 233


>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  160 bits (404), Expect = 1e-37
 Identities = 72/123 (58%), Positives = 95/123 (77%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           DLVSYNTLIN+YC++G+L+ A  L+DE+E  G+E DQYTHTI+VDG+C+ G+ DGA+RHL
Sbjct: 291 DLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHL 350

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQKDDFTYSMMVHGLCKARLFF 12
            +M   GF SNLVA NC + GL   G I+ A+R+FE ME KD FTY+++VH LC+AR F 
Sbjct: 351 NYMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTIVVHNLCRARRFL 410

Query: 11  PAA 3
            A+
Sbjct: 411 CAS 413



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/121 (31%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           D+VS+NTLI+   ++     +  L DE+ K GI  D ++H IL++ + ++G  D A R  
Sbjct: 82  DVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVF 141

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQ----KDDFTYSMMVHGLCKA 24
           K + ++  + +    N +I+GLC  G + +A+ +F  +++        TY+ +++GLCKA
Sbjct: 142 KEIVLRD-EVHPATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKA 200

Query: 23  R 21
           R
Sbjct: 201 R 201



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           D+V+YNTLI+ YC+   L+ A+ ++  +  +GI  D  +   L+ G  R      +    
Sbjct: 47  DVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLF 106

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQKDDF---TYSMMVHGLCK 27
             M  +G   +  + N L++ L  LG+ ++A RVF+++  +D+    TY++M++GLCK
Sbjct: 107 DEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRDEVHPATYNIMINGLCK 164


>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  158 bits (400), Expect = 4e-37
 Identities = 70/123 (56%), Positives = 94/123 (76%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           DL SYNTLIN+YCK+G LE A+ L+DE+EK G++ D+YTHTIL++ MC+ G+I GA RH+
Sbjct: 316 DLASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHM 375

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQKDDFTYSMMVHGLCKARLFF 12
           +HM M GF S LVA NC++ GLC  GQI+ A+++FE M+ +D FTYS +VH LCK   F 
Sbjct: 376 QHMNMMGFDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCKNGRFH 435

Query: 11  PAA 3
            A+
Sbjct: 436 RAS 438



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           D+ SYNTL++ + K GK E A  ++ ++   G+     T  I+++G+C+ G    A    
Sbjct: 141 DVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLF 200

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQK----DDFTYSMMVHGLCKA 24
           + ++  GF   L+  N LI+GLC   ++  A  + +++E      +  TY+ ++    ++
Sbjct: 201 RSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRS 260

Query: 23  RLF 15
           R F
Sbjct: 261 RRF 263



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
 Frame = -1

Query: 371 DLVSYNTLINVYCKEGKLETAFHLVDELEKSGIESDQYTHTILVDGMCRVGDIDGAERHL 192
           D+V+YN+LI    +   L  + +L DE+   GI  D +++  L+    ++G  + A   L
Sbjct: 106 DVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANEVL 165

Query: 191 KHMEMKGFKSNLVACNCLIHGLCSLGQIEDAMRVFEKMEQ----KDDFTYSMMVHGLCKA 24
           + +   G        N +I+GLC  G   +A+ +F  ++Q        TY+++++GLCK 
Sbjct: 166 RQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKD 225

Query: 23  R 21
           R
Sbjct: 226 R 226