BLASTX nr result

ID: Cimicifuga21_contig00031133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031133
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|XP_002534013.1| transcription factor, putative [Ricinus comm...   123   3e-26
ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   122   7e-26
ref|XP_002875479.1| hypothetical protein ARALYDRAFT_484661 [Arab...   119   4e-25

>ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|222849012|gb|EEE86559.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  130 bits (328), Expect = 2e-28
 Identities = 63/107 (58%), Positives = 74/107 (69%)
 Frame = -3

Query: 500 GSSAKELGFHNMKKRVTSRGSGEQAYXXXXXXXXXXXXXXRYGECQKNHAAKIGGYAVDG 321
           G  + ELG   M+KR  +    E+                +YGEC KNHAA +GGYAVDG
Sbjct: 25  GEGSVELGTSKMRKRQVAVRRTEEP--SRSSTTSFTIRNVKYGECLKNHAASVGGYAVDG 82

Query: 320 CREFMASGEEGTSGAMKCAACGCHRNFHRRDVEYEVVCECSSPSSNG 180
           CREFMASGEEGT+ A+ CAACGCHRNFHRR+VE EV+C+CSSPSSNG
Sbjct: 83  CREFMASGEEGTADALTCAACGCHRNFHRREVETEVICDCSSPSSNG 129


>ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|222866857|gb|EEF03988.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/66 (84%), Positives = 61/66 (92%)
 Frame = -3

Query: 377 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGAMKCAACGCHRNFHRRDVEYEVVCECS 198
           YGECQKNHAA +GGYAVDGCREFMASGEEGT+ A+ CAACGCHRNFHRR+VE EV C+CS
Sbjct: 30  YGECQKNHAAGVGGYAVDGCREFMASGEEGTAAALTCAACGCHRNFHRREVETEVACDCS 89

Query: 197 SPSSNG 180
           SPSSNG
Sbjct: 90  SPSSNG 95


>ref|XP_002534013.1| transcription factor, putative [Ricinus communis]
           gi|223525986|gb|EEF28371.1| transcription factor,
           putative [Ricinus communis]
          Length = 98

 Score =  123 bits (309), Expect = 3e-26
 Identities = 57/68 (83%), Positives = 62/68 (91%), Gaps = 2/68 (2%)
 Frame = -3

Query: 377 YGECQKNHAAKIGGYAVDGCREFMAS-GEEGTSGAMKCAACGCHRNFHRRDVEYE-VVCE 204
           YGECQKNHAA +GGYAVDGCREFMAS GEEGT+ A+ CAACGCHRNFHRR+VE E VVC+
Sbjct: 30  YGECQKNHAANVGGYAVDGCREFMASNGEEGTTAALTCAACGCHRNFHRREVETEQVVCD 89

Query: 203 CSSPSSNG 180
           CSSPSSNG
Sbjct: 90  CSSPSSNG 97


>ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 95

 Score =  122 bits (306), Expect = 7e-26
 Identities = 54/67 (80%), Positives = 59/67 (88%)
 Frame = -3

Query: 377 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGAMKCAACGCHRNFHRRDVEYEVVCECS 198
           YGECQKNHAA IGG+AVDGCREFMASG+EGTS  + CAACGCHRNFHRR+VE EV+C CS
Sbjct: 29  YGECQKNHAAGIGGHAVDGCREFMASGQEGTSSELICAACGCHRNFHRREVETEVLCPCS 88

Query: 197 SPSSNGR 177
           S  SNGR
Sbjct: 89  SAPSNGR 95


>ref|XP_002875479.1| hypothetical protein ARALYDRAFT_484661 [Arabidopsis lyrata subsp.
           lyrata] gi|297321317|gb|EFH51738.1| hypothetical protein
           ARALYDRAFT_484661 [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score =  119 bits (299), Expect = 4e-25
 Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
 Frame = -3

Query: 467 MKKR--VTSRGSGEQAYXXXXXXXXXXXXXXRYGECQKNHAAKIGGYAVDGCREFMAS-G 297
           M+KR  V  R S E+                RYGECQKNHAA +GGYAVDGCREFMAS G
Sbjct: 1   MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 296 EEGTSGAMKCAACGCHRNFHRRDVEYEVVCECSSPSSNG 180
           EEGT  A+ CAACGCHR+FHRR++E EVVC+C+SP S G
Sbjct: 61  EEGTLAALTCAACGCHRSFHRREIETEVVCDCNSPPSTG 99


Top