BLASTX nr result

ID: Cimicifuga21_contig00031125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031125
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [V...    69   4e-10
emb|CBI30256.3| unnamed protein product [Vitis vinifera]               69   4e-10
emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]    69   4e-10
ref|XP_002532192.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 442

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 9/70 (12%)
 Frame = -2

Query: 184 HDVVLEMLE------ERMEQKIHQ---MLDPSVGSSSCCISRVPRKLAEINCKAYEPEIV 32
           +DVV+ + E       RM+QKI +   +L  S G SSCCI RVPR L EIN ++Y+P I+
Sbjct: 7   NDVVVRIWEVNKERLARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQPHII 66

Query: 31  SIGPYYRGHP 2
           SIGPY+RG P
Sbjct: 67  SIGPYHRGEP 76


>emb|CBI30256.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 9/70 (12%)
 Frame = -2

Query: 184 HDVVLEMLE------ERMEQKIHQ---MLDPSVGSSSCCISRVPRKLAEINCKAYEPEIV 32
           +DVV+ + E       RM+QKI +   +L  S G SSCCI RVPR L EIN ++Y+P I+
Sbjct: 6   NDVVVRIWEVNKERLARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQPHII 65

Query: 31  SIGPYYRGHP 2
           SIGPY+RG P
Sbjct: 66  SIGPYHRGEP 75


>emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]
          Length = 441

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 9/70 (12%)
 Frame = -2

Query: 184 HDVVLEMLE------ERMEQKIHQ---MLDPSVGSSSCCISRVPRKLAEINCKAYEPEIV 32
           +DVV+ + E       RM+QKI +   +L  S G SSCCI RVPR L EIN ++Y+P I+
Sbjct: 6   NDVVVRIWEVNKERLARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQPHII 65

Query: 31  SIGPYYRGHP 2
           SIGPY+RG P
Sbjct: 66  SIGPYHRGEP 75


>ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis]
           gi|223528124|gb|EEF30195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
 Frame = -2

Query: 205 NERGGETHDVVLEMLEERME---------QKIHQMLDPSVGSSSCCISRVPRKLAEINCK 53
           N   G+T D V+ +  E  E          K+ ++L+ + G SSCCI RVP+ LA+IN K
Sbjct: 12  NHENGKTSDHVIAISTEASEWLASLEDKISKMPKLLNKTAGKSSCCIFRVPKSLAQINEK 71

Query: 52  AYEPEIVSIGPYYRGH 5
           AY+P IVSIGPY+ G+
Sbjct: 72  AYQPHIVSIGPYHHGN 87


>ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|222833186|gb|EEE71663.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -2

Query: 157 ERMEQKIHQMLDPSVGSSSCCISRVPRKLAEINCKAYEPEIVSIGPYYRG 8
           E+  + + ++L  S G SSCCI RVP+ L EIN KAY P IVSIGPY+ G
Sbjct: 38  EKKTKLLPKLLKKSAGKSSCCIFRVPQSLVEINKKAYHPHIVSIGPYHHG 87


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