BLASTX nr result

ID: Cimicifuga21_contig00031101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031101
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|1...   144   1e-32
emb|CBI29903.3| unnamed protein product [Vitis vinifera]              135   5e-30
ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245...   135   5e-30
ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis l...   135   6e-30
ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|26...   133   2e-29

>ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|118483996|gb|ABK93885.1|
           unknown [Populus trichocarpa]
           gi|222872923|gb|EEF10054.1| predicted protein [Populus
           trichocarpa]
          Length = 248

 Score =  144 bits (364), Expect = 1e-32
 Identities = 79/153 (51%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
 Frame = -2

Query: 627 RNTGSILPSWYPRRPFQDVTAVVDAIERRRTRLREFEQHRLASPLQQPLDAQQELGTPAP 448
           R + S+LP+WYPR P +DVTAVV AIERRR RL   +   + SP+ Q +    +     P
Sbjct: 97  RGSNSVLPAWYPRTPLRDVTAVVRAIERRRERLGGSDGLEIRSPMPQ-VRMNHDSSEATP 155

Query: 447 GAPLEHSFDLTTPKPTTTIKNFQLPAHVMSKSL--LRNQAEGDTEFLTPQKKLLNSIDQV 274
            A LEHS  + +PKPTT +K        + K L  + NQA GD + LTPQKKLLNSID V
Sbjct: 156 VAHLEHSNRIMSPKPTTAVKGCSSTIGKVPKILQHITNQASGDPDSLTPQKKLLNSIDTV 215

Query: 273 EKVMKEEFKRMKRTPTAKRAERNNKVRTLMAMR 175
           EKV+ EE ++MKRTP+A++AER  +VRTLM+MR
Sbjct: 216 EKVVMEELRKMKRTPSARKAEREKRVRTLMSMR 248


>emb|CBI29903.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  135 bits (341), Expect = 5e-30
 Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
 Frame = -2

Query: 627 RNTGSILPSWYPRRPFQDVTAVVDAIERRRTRLREFEQHRLASPLQQPLDAQQELGTPAP 448
           R+  S+LPSWYPR P +D+T VV AIERRR RLRE +  ++  P+ Q +    +   P  
Sbjct: 92  RSGNSVLPSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDIPIPQDISDVHDPILPPS 151

Query: 447 GAPLEHSFDLTTPKPTTTIKNFQLPAHVMSKSLL--RNQAEGDTEFLTPQKKLLNSIDQV 274
            A LE    + +P PT+ +K        + K LL   +Q  G ++FLTPQKKLLNSID V
Sbjct: 152 SAQLEQDISMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTV 211

Query: 273 EKVMKEEFKRMKRTPTAKRAERNNKVRTLMAMR 175
           EK + +E  ++KRTP+AKRAE+  +VRTLM+MR
Sbjct: 212 EKAVMDELGKLKRTPSAKRAEQEKRVRTLMSMR 244


>ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245175 [Vitis vinifera]
          Length = 266

 Score =  135 bits (341), Expect = 5e-30
 Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
 Frame = -2

Query: 627 RNTGSILPSWYPRRPFQDVTAVVDAIERRRTRLREFEQHRLASPLQQPLDAQQELGTPAP 448
           R+  S+LPSWYPR P +D+T VV AIERRR RLRE +  ++  P+ Q +    +   P  
Sbjct: 114 RSGNSVLPSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDIPIPQDISDVHDPILPPS 173

Query: 447 GAPLEHSFDLTTPKPTTTIKNFQLPAHVMSKSLL--RNQAEGDTEFLTPQKKLLNSIDQV 274
            A LE    + +P PT+ +K        + K LL   +Q  G ++FLTPQKKLLNSID V
Sbjct: 174 SAQLEQDISMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTV 233

Query: 273 EKVMKEEFKRMKRTPTAKRAERNNKVRTLMAMR 175
           EK + +E  ++KRTP+AKRAE+  +VRTLM+MR
Sbjct: 234 EKAVMDELGKLKRTPSAKRAEQEKRVRTLMSMR 266


>ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297327668|gb|EFH58088.1| polychome, UV-B-insensitive
           4 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  135 bits (340), Expect = 6e-30
 Identities = 74/154 (48%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
 Frame = -2

Query: 627 RNTGSILPSWYPRRPFQDVTAVVDAIERRRTRLREFEQHRLASPLQQPLDAQQELGTPAP 448
           R + S+LPSWYPR P +DV+AVV A+ERRR R+ E     + +P  Q L     L  P  
Sbjct: 106 RASNSVLPSWYPRTPLRDVSAVVRAVERRRARMGEGVGRDIETPTPQQLGVLDSL-VPLS 164

Query: 447 GAPLEHSFDLTTPKPTTTIKNFQLPAHVMSKSLLRN---QAEGDTEFLTPQKKLLNSIDQ 277
           GA LEH + + TP P+   K    P+      +L +   +  G+ + LTPQKKLLNSID+
Sbjct: 165 GAQLEHDYSMVTPGPSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDK 224

Query: 276 VEKVMKEEFKRMKRTPTAKRAERNNKVRTLMAMR 175
           VEKV+ EE ++MK TP+AKRAER  +VRTLM+MR
Sbjct: 225 VEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 258


>ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|2673916|gb|AAB88650.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28950705|gb|AAO63276.1| At2g42260 [Arabidopsis
           thaliana] gi|110735686|dbj|BAE99823.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330255003|gb|AEC10097.1| uv-b-insensitive 4
           [Arabidopsis thaliana]
          Length = 259

 Score =  133 bits (335), Expect = 2e-29
 Identities = 73/154 (47%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
 Frame = -2

Query: 627 RNTGSILPSWYPRRPFQDVTAVVDAIERRRTRLREFEQHRLASPLQQPLDAQQELGTPAP 448
           R + S+LPSWYPR P +D++AVV AIERRR R+ E     + +P  Q L     L  P  
Sbjct: 107 RASNSVLPSWYPRTPLRDISAVVRAIERRRARMGEGVGRDIETPTPQQLGVLDSL-VPLS 165

Query: 447 GAPLEHSFDLTTPKPTTTIKNFQLPAHVMSKSLLRN---QAEGDTEFLTPQKKLLNSIDQ 277
           GA LEH + + TP P+   K    P+      +L +   +  G+ + LTP+KKLLNSID+
Sbjct: 166 GAHLEHDYSMVTPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDK 225

Query: 276 VEKVMKEEFKRMKRTPTAKRAERNNKVRTLMAMR 175
           VEKV+ EE ++MK TP+AKRAER  +VRTLM+MR
Sbjct: 226 VEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259


Top