BLASTX nr result

ID: Cimicifuga21_contig00030984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030984
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523146.1| nucleic acid binding protein, putative [Rici...   139   2e-31
gb|EEC81157.1| hypothetical protein OsI_24073 [Oryza sativa Indi...   137   7e-31
ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_002268125.2| PREDICTED: uncharacterized protein LOC100247...   136   2e-30
emb|CBI31077.3| unnamed protein product [Vitis vinifera]              136   2e-30

>ref|XP_002523146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223537553|gb|EEF39177.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 700

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/94 (71%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 DIIIVEGEMDKLSMEEAGFHNCVSVPDGAPPKVS-KEMPSEEKDTKYQYLWNCKEYFEKA 104
           DIIIVEGEMDKL+MEEAGF NCVSVPDGAP +VS KE+PS+E+DTKYQYLWNCKEY +KA
Sbjct: 283 DIIIVEGEMDKLAMEEAGFRNCVSVPDGAPGQVSQKELPSKEQDTKYQYLWNCKEYLDKA 342

Query: 103 SRIILATDADVPGQXXXXXXXXXXXXXRCWRVKW 2
           SRIILATD D PGQ             RCWR++W
Sbjct: 343 SRIILATDGDPPGQALAEEIARRIGRERCWRIRW 376


>gb|EEC81157.1| hypothetical protein OsI_24073 [Oryza sativa Indica Group]
           gi|222636070|gb|EEE66202.1| hypothetical protein
           OsJ_22328 [Oryza sativa Japonica Group]
          Length = 698

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/93 (68%), Positives = 72/93 (77%)
 Frame = -3

Query: 280 DIIIVEGEMDKLSMEEAGFHNCVSVPDGAPPKVSKEMPSEEKDTKYQYLWNCKEYFEKAS 101
           DIIIVEGE+DKLSMEEAG+ NCVSVPDGAPPKVS ++P +++D KYQYLWNCKEY + AS
Sbjct: 276 DIIIVEGEIDKLSMEEAGYRNCVSVPDGAPPKVSSKLPDKDQDKKYQYLWNCKEYLDPAS 335

Query: 100 RIILATDADVPGQXXXXXXXXXXXXXRCWRVKW 2
           RIILATDAD PGQ             RCWRV W
Sbjct: 336 RIILATDADPPGQALAEELARRLGKERCWRVNW 368


>ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|222846276|gb|EEE83823.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/94 (70%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 DIIIVEGEMDKLSMEEAGFHNCVSVPDGAPPKVS-KEMPSEEKDTKYQYLWNCKEYFEKA 104
           +IIIVEGEMDKL+MEEAGF NCVSVPDGAPP VS KE+P  ++DTKYQYLWNCKEY +K 
Sbjct: 229 EIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSVSPKELPPNQEDTKYQYLWNCKEYLDKV 288

Query: 103 SRIILATDADVPGQXXXXXXXXXXXXXRCWRVKW 2
           SRIILATD D PGQ             RCWRVKW
Sbjct: 289 SRIILATDGDPPGQALAEELARRLGRERCWRVKW 322


>ref|XP_002268125.2| PREDICTED: uncharacterized protein LOC100247384 [Vitis vinifera]
          Length = 519

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/94 (72%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 DIIIVEGEMDKLSMEEAGFHNCVSVPDGAPPKVS-KEMPSEEKDTKYQYLWNCKEYFEKA 104
           DIIIVEGE+DKLSMEEAGF+NCVSVPDGAPP VS K   SEEKD KYQYLWNCKEY EKA
Sbjct: 286 DIIIVEGEIDKLSMEEAGFYNCVSVPDGAPPSVSTKVFESEEKDIKYQYLWNCKEYLEKA 345

Query: 103 SRIILATDADVPGQXXXXXXXXXXXXXRCWRVKW 2
           SRIILATD D PG              RCW+VKW
Sbjct: 346 SRIILATDGDAPGLALAEELARRLGRERCWQVKW 379


>emb|CBI31077.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/94 (72%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 DIIIVEGEMDKLSMEEAGFHNCVSVPDGAPPKVS-KEMPSEEKDTKYQYLWNCKEYFEKA 104
           DIIIVEGE+DKLSMEEAGF+NCVSVPDGAPP VS K   SEEKD KYQYLWNCKEY EKA
Sbjct: 286 DIIIVEGEIDKLSMEEAGFYNCVSVPDGAPPSVSTKVFESEEKDIKYQYLWNCKEYLEKA 345

Query: 103 SRIILATDADVPGQXXXXXXXXXXXXXRCWRVKW 2
           SRIILATD D PG              RCW+VKW
Sbjct: 346 SRIILATDGDAPGLALAEELARRLGRERCWQVKW 379


Top