BLASTX nr result

ID: Cimicifuga21_contig00030886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030886
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    60   2e-07
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    60   2e-07
ref|XP_002438790.1| hypothetical protein SORBIDRAFT_10g026280 [S...    57   1e-06

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = +3

Query: 6   LDGHAVFLGKNTSLSVLASDYPGYKPNCIYYTDNMPMFRYFCPVTPGHLGIFNFEDGSTE 185
           L   A+FLG+N SLS+ + D+PG K NCIYYTD+     Y        LGIFN EDGS E
Sbjct: 308 LGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIE 367

Query: 186 QL 191
            L
Sbjct: 368 PL 369


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = +3

Query: 6   LDGHAVFLGKNTSLSVLASDYPGYKPNCIYYTDNMPMFRYFCPVTPGHLGIFNFEDGSTE 185
           L   A+FLG+N SLS+ + D+PG K NCIYYTD+     Y        LGIFN EDGS E
Sbjct: 308 LGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIE 367

Query: 186 QL 191
            L
Sbjct: 368 PL 369


>ref|XP_002438790.1| hypothetical protein SORBIDRAFT_10g026280 [Sorghum bicolor]
           gi|241917013|gb|EER90157.1| hypothetical protein
           SORBIDRAFT_10g026280 [Sorghum bicolor]
          Length = 460

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +3

Query: 6   LDGHAVFLGKNTSLSVLASDYPGYKPNCIYYTDNMPMFRYFCPVTPGHLGIFNFEDGSTE 185
           L  HA+F+G N S ++ A+D  G  P+ +YYTDN   +  + P  P  +GI+N  DGS  
Sbjct: 376 LGDHALFVGCNYSFALAATDSAGVLPSHVYYTDNEEQYALYSPECPRDIGIYNVGDGSFH 435

Query: 186 QLYP 197
           Q+ P
Sbjct: 436 QIQP 439


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