BLASTX nr result

ID: Cimicifuga21_contig00030880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030880
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS52574.1| nodulin family protein [Gossypium hirsutum]             82   5e-14
gb|ACD56621.1| putative nodulin-like protein [Gossypioides kirkii]     80   2e-13
ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
gb|AFK47115.1| unknown [Medicago truncatula]                           77   1e-12

>gb|ABS52574.1| nodulin family protein [Gossypium hirsutum]
          Length = 385

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/74 (50%), Positives = 52/74 (70%)
 Frame = -2

Query: 294 MGGKGSFGESLAATLNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXX 115
           MG + S   +L+  LNK KPYLA++ LQ G+AGMYI+S +C+K G+S+++L  YRH    
Sbjct: 1   MGDQTSSASALSDVLNKAKPYLAIISLQFGYAGMYILSTICMKHGMSNFILATYRHVVAT 60

Query: 114 XXXAPFAFILERSL 73
              APFAF+LER +
Sbjct: 61  IVIAPFAFVLERKI 74


>gb|ACD56621.1| putative nodulin-like protein [Gossypioides kirkii]
          Length = 382

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -2

Query: 294 MGGKGSFGESLAATLNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXX 115
           MGG+  +  +L   LNK+KPYL+MV LQ G+AGMYI+SM+ LK G+S+++L  YRH    
Sbjct: 1   MGGQTPYA-ALRNMLNKVKPYLSMVSLQFGYAGMYIISMVSLKHGMSNFILATYRHVAAT 59

Query: 114 XXXAPFAFILERSL 73
              APFAF+LER +
Sbjct: 60  VVIAPFAFVLERKV 73


>ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/60 (60%), Positives = 45/60 (75%)
 Frame = -2

Query: 252 LNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXXXXXAPFAFILERSL 73
           L K+KPYLAMV LQ G+AGMYI++M+ LK G+SHY+L VYRH       APFA +LER +
Sbjct: 1   LKKVKPYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATIVIAPFALVLERKI 60


>ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|222856075|gb|EEE93622.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
 Frame = -2

Query: 252 LNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXXXXXAPFAFILER-- 79
           L K+K YLAMV LQ G+AGMYI++M+ LK G+SHY+L VYRH       APFAF+LER  
Sbjct: 1   LKKVKHYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATLVIAPFAFVLERKI 60

Query: 78  --SLSLSPYIHI 49
              L+LS ++ I
Sbjct: 61  RPKLTLSIFLRI 72


>gb|AFK47115.1| unknown [Medicago truncatula]
          Length = 382

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/66 (54%), Positives = 47/66 (71%)
 Frame = -2

Query: 270 ESLAATLNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXXXXXAPFAF 91
           E ++  L K+KPYLAMV LQ G+AGMYI++M+  K G+SH+VL VYRH       APFA 
Sbjct: 6   EKMSKGLRKIKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVIATIFMAPFAL 65

Query: 90  ILERSL 73
           +LER +
Sbjct: 66  VLERKI 71


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