BLASTX nr result
ID: Cimicifuga21_contig00030880
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00030880 (322 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABS52574.1| nodulin family protein [Gossypium hirsutum] 82 5e-14 gb|ACD56621.1| putative nodulin-like protein [Gossypioides kirkii] 80 2e-13 ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|2... 79 5e-13 ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|2... 78 7e-13 gb|AFK47115.1| unknown [Medicago truncatula] 77 1e-12 >gb|ABS52574.1| nodulin family protein [Gossypium hirsutum] Length = 385 Score = 82.0 bits (201), Expect = 5e-14 Identities = 37/74 (50%), Positives = 52/74 (70%) Frame = -2 Query: 294 MGGKGSFGESLAATLNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXX 115 MG + S +L+ LNK KPYLA++ LQ G+AGMYI+S +C+K G+S+++L YRH Sbjct: 1 MGDQTSSASALSDVLNKAKPYLAIISLQFGYAGMYILSTICMKHGMSNFILATYRHVVAT 60 Query: 114 XXXAPFAFILERSL 73 APFAF+LER + Sbjct: 61 IVIAPFAFVLERKI 74 >gb|ACD56621.1| putative nodulin-like protein [Gossypioides kirkii] Length = 382 Score = 79.7 bits (195), Expect = 2e-13 Identities = 39/74 (52%), Positives = 53/74 (71%) Frame = -2 Query: 294 MGGKGSFGESLAATLNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXX 115 MGG+ + +L LNK+KPYL+MV LQ G+AGMYI+SM+ LK G+S+++L YRH Sbjct: 1 MGGQTPYA-ALRNMLNKVKPYLSMVSLQFGYAGMYIISMVSLKHGMSNFILATYRHVAAT 59 Query: 114 XXXAPFAFILERSL 73 APFAF+LER + Sbjct: 60 VVIAPFAFVLERKV 73 >ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1| predicted protein [Populus trichocarpa] Length = 349 Score = 78.6 bits (192), Expect = 5e-13 Identities = 36/60 (60%), Positives = 45/60 (75%) Frame = -2 Query: 252 LNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXXXXXAPFAFILERSL 73 L K+KPYLAMV LQ G+AGMYI++M+ LK G+SHY+L VYRH APFA +LER + Sbjct: 1 LKKVKPYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATIVIAPFALVLERKI 60 >ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|222856075|gb|EEE93622.1| predicted protein [Populus trichocarpa] Length = 344 Score = 78.2 bits (191), Expect = 7e-13 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 4/72 (5%) Frame = -2 Query: 252 LNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXXXXXAPFAFILER-- 79 L K+K YLAMV LQ G+AGMYI++M+ LK G+SHY+L VYRH APFAF+LER Sbjct: 1 LKKVKHYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATLVIAPFAFVLERKI 60 Query: 78 --SLSLSPYIHI 49 L+LS ++ I Sbjct: 61 RPKLTLSIFLRI 72 >gb|AFK47115.1| unknown [Medicago truncatula] Length = 382 Score = 77.0 bits (188), Expect = 1e-12 Identities = 36/66 (54%), Positives = 47/66 (71%) Frame = -2 Query: 270 ESLAATLNKLKPYLAMVGLQCGFAGMYIVSMLCLKRGLSHYVLVVYRHXXXXXXXAPFAF 91 E ++ L K+KPYLAMV LQ G+AGMYI++M+ K G+SH+VL VYRH APFA Sbjct: 6 EKMSKGLRKIKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVIATIFMAPFAL 65 Query: 90 ILERSL 73 +LER + Sbjct: 66 VLERKI 71