BLASTX nr result

ID: Cimicifuga21_contig00030835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030835
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...   136   2e-30
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]   103   2e-30
ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica...    69   4e-10

>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/71 (94%), Positives = 67/71 (94%)
 Frame = +2

Query: 44  EWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDVSIIS 223
           EWA RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTD  II 
Sbjct: 177 EWAPRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDGLIIL 236

Query: 224 DHEDPGRASGF 256
           DHEDPGRASGF
Sbjct: 237 DHEDPGRASGF 247


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score =  103 bits (256), Expect(2) = 2e-30
 Identities = 51/55 (92%), Positives = 51/55 (92%)
 Frame = +2

Query: 86  GLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDVSIISDHEDPGRAS 250
           GLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTD  II DHED GRAS
Sbjct: 189 GLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDGFIILDHEDAGRAS 243



 Score = 54.3 bits (129), Expect(2) = 2e-30
 Identities = 27/31 (87%), Positives = 27/31 (87%), Gaps = 2/31 (6%)
 Frame = +1

Query: 1   GSSSSHPQGPP--CEARVGSAVSPHSNYVRG 87
           GSSSS PQGP   CEARVGSAVSPHSNYVRG
Sbjct: 159 GSSSSQPQGPALRCEARVGSAVSPHSNYVRG 189


>ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|222869001|gb|EEF06132.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  130 bits (328), Expect = 9e-29
 Identities = 64/71 (90%), Positives = 65/71 (91%)
 Frame = +2

Query: 44  EWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDVSIIS 223
           EWAQRSAPIRITLGGLSLLPDLERYYESSV DSIAAA+WFT TTKKSHAYVTV D  II 
Sbjct: 18  EWAQRSAPIRITLGGLSLLPDLERYYESSVSDSIAAAVWFTSTTKKSHAYVTVIDGLIIL 77

Query: 224 DHEDPGRASGF 256
           DHEDPGRASGF
Sbjct: 78  DHEDPGRASGF 88


>ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|222869002|gb|EEF06133.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/71 (90%), Positives = 65/71 (91%)
 Frame = +2

Query: 44  EWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDVSIIS 223
           EWAQRSAPIRI LGGLSLLPDL+RYYESSVPDSIAAAIWFTGTTKKSHAYVTV D  II 
Sbjct: 18  EWAQRSAPIRIILGGLSLLPDLKRYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL 77

Query: 224 DHEDPGRASGF 256
           DHEDPG ASGF
Sbjct: 78  DHEDPG-ASGF 87


>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477313|gb|AES58516.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 346

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/40 (87%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = -2

Query: 226 VRDNTYISNS-NVSMRLFGSTGEPDGRGDGIWDGRLVVSL 110
           V+DN  ISNS NVSMRLFGSTGEPDGRGDGIWDG LVVSL
Sbjct: 307 VQDNQTISNSSNVSMRLFGSTGEPDGRGDGIWDGGLVVSL 346


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