BLASTX nr result

ID: Cimicifuga21_contig00030792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030792
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313253.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002536881.1| conserved hypothetical protein [Ricinus comm...   124   8e-27
ref|XP_002299983.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
emb|CBI24236.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002275834.1| PREDICTED: uncharacterized protein LOC100261...   118   6e-25

>ref|XP_002313253.1| predicted protein [Populus trichocarpa] gi|222849661|gb|EEE87208.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/107 (57%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
 Frame = -3

Query: 316 AIAPCCHPQVLRSSVKLIFWEGTTKILTGTS--IAGELMFQFPNMVVCHADSFYIGHPVP 143
           A+ PC H     S VKLIFWEGTT+ILTG++  IAGE+MFQ P+ +VCHADSF+IGHPVP
Sbjct: 4   AVFPCFHQSSRSSVVKLIFWEGTTRILTGSNKHIAGEIMFQNPDKMVCHADSFFIGHPVP 63

Query: 142 TLSIEDKLVSGETYFVLPIERFACKVXXXXXXXXXXSNLKTVPTNSG 2
           +L+I+D+L+ G+TYFVLP++RFAC V          S+ K  P N G
Sbjct: 64  SLAIDDELMPGQTYFVLPLDRFACNVLSASSLAAFSSSPKRTPINFG 110


>ref|XP_002536881.1| conserved hypothetical protein [Ricinus communis]
           gi|223518254|gb|EEF25502.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/106 (56%), Positives = 78/106 (73%)
 Frame = -3

Query: 319 NAIAPCCHPQVLRSSVKLIFWEGTTKILTGTSIAGELMFQFPNMVVCHADSFYIGHPVPT 140
           NAI+PC   Q  RSSVKLIF+EGTT+ILTG  IAGE+MF+ P+ +VCHADSF+IGHP+P 
Sbjct: 3   NAISPCFQ-QSSRSSVKLIFFEGTTRILTGRHIAGEIMFENPDKMVCHADSFFIGHPLPA 61

Query: 139 LSIEDKLVSGETYFVLPIERFACKVXXXXXXXXXXSNLKTVPTNSG 2
           L+I+D+L+ GETYF+LPI+RF+C V           + +  P N G
Sbjct: 62  LAIDDELLPGETYFILPIDRFSCNVLTAASLSALTCSPRPAPINFG 107


>ref|XP_002299983.1| predicted protein [Populus trichocarpa] gi|222847241|gb|EEE84788.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/108 (56%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
 Frame = -3

Query: 319 NAIAPCCHPQVLRSSVKLIFWEGTTKILTGTS--IAGELMFQFPNMVVCHADSFYIGHPV 146
           NA++PC H     S VKLIFWEGTT+ILTG+S  IAGE+MF+ P+M+VCHADSF+IG PV
Sbjct: 3   NAVSPCFHQSSRASFVKLIFWEGTTRILTGSSKHIAGEIMFENPDMMVCHADSFFIGQPV 62

Query: 145 PTLSIEDKLVSGETYFVLPIERFACKVXXXXXXXXXXSNLKTVPTNSG 2
           P+L+I+D+L+ G+TYFVLP++RFA  V          S+ K  P N G
Sbjct: 63  PSLAIDDELMPGQTYFVLPLDRFAFNVLSASSLAAFSSSPKRTPINFG 110


>emb|CBI24236.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/85 (62%), Positives = 70/85 (82%)
 Frame = -3

Query: 319 NAIAPCCHPQVLRSSVKLIFWEGTTKILTGTSIAGELMFQFPNMVVCHADSFYIGHPVPT 140
           NA++PC   Q  +SSVKL+FWEGTT+ILTG  +AGE+MF+FP+ +VCHADSF+IG  VP 
Sbjct: 3   NAVSPC-FKQSSKSSVKLVFWEGTTRILTGKHLAGEIMFEFPDRMVCHADSFFIGRVVPA 61

Query: 139 LSIEDKLVSGETYFVLPIERFACKV 65
           L+I+D+L+  +TYFVLPI+ FAC V
Sbjct: 62  LAIDDELIPAQTYFVLPIDLFACNV 86


>ref|XP_002275834.1| PREDICTED: uncharacterized protein LOC100261894 [Vitis vinifera]
          Length = 220

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/85 (62%), Positives = 70/85 (82%)
 Frame = -3

Query: 319 NAIAPCCHPQVLRSSVKLIFWEGTTKILTGTSIAGELMFQFPNMVVCHADSFYIGHPVPT 140
           NA++PC   Q  +SSVKL+FWEGTT+ILTG  +AGE+MF+FP+ +VCHADSF+IG  VP 
Sbjct: 3   NAVSPC-FKQSSKSSVKLVFWEGTTRILTGKHLAGEIMFEFPDRMVCHADSFFIGRVVPA 61

Query: 139 LSIEDKLVSGETYFVLPIERFACKV 65
           L+I+D+L+  +TYFVLPI+ FAC V
Sbjct: 62  LAIDDELIPAQTYFVLPIDLFACNV 86


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