BLASTX nr result

ID: Cimicifuga21_contig00030765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030765
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301939.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]    73   2e-11
ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
emb|CBI18900.3| unnamed protein product [Vitis vinifera]               72   4e-11
gb|ABR17838.1| unknown [Picea sitchensis]                              71   8e-11

>ref|XP_002301939.1| predicted protein [Populus trichocarpa] gi|222843665|gb|EEE81212.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -3

Query: 200 GMQPNEVTLISVLPVCAYMQALDEGKCVHVYAVNWVFLSETKVVNSLISMYGKCRAVDAA 21
           G++PNEVT+I V+  CA +  LD GKC+H  AV    L E KVVNSLI++YGKC  ++AA
Sbjct: 135 GLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAA 194

Query: 20  CRLFE 6
           C LFE
Sbjct: 195 CCLFE 199


>emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/65 (58%), Positives = 45/65 (69%)
 Frame = -3

Query: 200 GMQPNEVTLISVLPVCAYMQALDEGKCVHVYAVNWVFLSETKVVNSLISMYGKCRAVDAA 21
           G QPNEVTL+SV+  CA M ALDEGK +H   V      + KVVNSLI+MYGK   +DAA
Sbjct: 236 GRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 295

Query: 20  CRLFE 6
            +LFE
Sbjct: 296 SQLFE 300


>ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/65 (58%), Positives = 45/65 (69%)
 Frame = -3

Query: 200 GMQPNEVTLISVLPVCAYMQALDEGKCVHVYAVNWVFLSETKVVNSLISMYGKCRAVDAA 21
           G QPNEVTL+SV+  CA M ALDEGK +H   V      + KVVNSLI+MYGK   +DAA
Sbjct: 216 GRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 275

Query: 20  CRLFE 6
            +LFE
Sbjct: 276 SQLFE 280


>emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/65 (58%), Positives = 45/65 (69%)
 Frame = -3

Query: 200 GMQPNEVTLISVLPVCAYMQALDEGKCVHVYAVNWVFLSETKVVNSLISMYGKCRAVDAA 21
           G QPNEVTL+SV+  CA M ALDEGK +H   V      + KVVNSLI+MYGK   +DAA
Sbjct: 159 GRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 218

Query: 20  CRLFE 6
            +LFE
Sbjct: 219 SQLFE 223


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = -3

Query: 200 GMQPNEVTLISVLPVCAYMQALDEGKCVHVYAVNWVFLSETKVVNSLISMYGKCRAVDAA 21
           G++PN  TL+SV+PVCA++ AL++GK +H YA+     S+  VVN L++MY KC  V+ A
Sbjct: 216 GIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTA 275

Query: 20  CRLFE 6
            +LFE
Sbjct: 276 HKLFE 280



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/65 (46%), Positives = 48/65 (73%)
 Frame = -3

Query: 200 GMQPNEVTLISVLPVCAYMQALDEGKCVHVYAVNWVFLSETKVVNSLISMYGKCRAVDAA 21
           G++PN +T++SVLP CA++ AL++G+ +H YA+   F S   V N+L++MY KC  V++A
Sbjct: 317 GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSA 376

Query: 20  CRLFE 6
            +LFE
Sbjct: 377 YKLFE 381



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = -3

Query: 200 GMQPNEVTLISVLPVCAYMQALDEGKCVHVYAVNWVFLSETKVVNSLISMYGKCRAVDAA 21
           G++P+   ++SVLP CA+  AL++GK +H Y +   F S   V   L+ +Y KC  V+ A
Sbjct: 418 GIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTA 477

Query: 20  CRLFE 6
            +LFE
Sbjct: 478 QKLFE 482


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