BLASTX nr result

ID: Cimicifuga21_contig00030711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030711
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21766.3| unnamed protein product [Vitis vinifera]              274   6e-72
ref|XP_002266198.1| PREDICTED: mitotic spindle assembly checkpoi...   274   6e-72
ref|XP_002332204.1| predicted protein [Populus trichocarpa] gi|2...   271   3e-71
ref|XP_003596189.1| Mitotic spindle assembly checkpoint protein ...   256   1e-66
ref|XP_002513406.1| Mitotic spindle assembly checkpoint protein ...   254   5e-66

>emb|CBI21766.3| unnamed protein product [Vitis vinifera]
          Length = 183

 Score =  274 bits (700), Expect = 6e-72
 Identities = 131/173 (75%), Positives = 151/173 (87%)
 Frame = +1

Query: 4   RKDNQSPQVQIAQILVEFLEVAITSIVFLKGVYPSDAFERRRYMNVVVHRARHPQLRDYI 183
           R++NQSPQ + A+ILVEFLEVAITSIVFLKG+YPS AFERRRYMN VV RARHPQLRDYI
Sbjct: 3   RRENQSPQNETARILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPQLRDYI 62

Query: 184 HSAVKGLQPFVEKGVVDRVAVIFFNNDNIPMERFVFNLAVSQSYKSNVEEIDLEFSLRSF 363
           HSAV GL PF++KG+V+RVAVIFFN DNIP+ERF+F LAV+QSY S VEE  LEFSLRSF
Sbjct: 63  HSAVSGLLPFIQKGLVERVAVIFFNVDNIPIERFIFKLAVNQSYDSKVEEAALEFSLRSF 122

Query: 364 LVKLPVTEPLSKILPRDCRWEITAYFRALPQDNPRKEADLWIPTDTKQWDQPP 522
           L+KLPV+E L+K LPRDCRWEITAYF +LP  +  K+A++WIPTDTKQW  PP
Sbjct: 123 LIKLPVSETLTKALPRDCRWEITAYFHSLPDASRSKDAEVWIPTDTKQWQTPP 175


>ref|XP_002266198.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B [Vitis
           vinifera]
          Length = 204

 Score =  274 bits (700), Expect = 6e-72
 Identities = 131/173 (75%), Positives = 151/173 (87%)
 Frame = +1

Query: 4   RKDNQSPQVQIAQILVEFLEVAITSIVFLKGVYPSDAFERRRYMNVVVHRARHPQLRDYI 183
           R++NQSPQ + A+ILVEFLEVAITSIVFLKG+YPS AFERRRYMN VV RARHPQLRDYI
Sbjct: 3   RRENQSPQNETARILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPQLRDYI 62

Query: 184 HSAVKGLQPFVEKGVVDRVAVIFFNNDNIPMERFVFNLAVSQSYKSNVEEIDLEFSLRSF 363
           HSAV GL PF++KG+V+RVAVIFFN DNIP+ERF+F LAV+QSY S VEE  LEFSLRSF
Sbjct: 63  HSAVSGLLPFIQKGLVERVAVIFFNVDNIPIERFIFKLAVNQSYDSKVEEAALEFSLRSF 122

Query: 364 LVKLPVTEPLSKILPRDCRWEITAYFRALPQDNPRKEADLWIPTDTKQWDQPP 522
           L+KLPV+E L+K LPRDCRWEITAYF +LP  +  K+A++WIPTDTKQW  PP
Sbjct: 123 LIKLPVSETLTKALPRDCRWEITAYFHSLPDASRSKDAEVWIPTDTKQWQTPP 175


>ref|XP_002332204.1| predicted protein [Populus trichocarpa] gi|222875311|gb|EEF12442.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  271 bits (694), Expect = 3e-71
 Identities = 134/171 (78%), Positives = 150/171 (87%)
 Frame = +1

Query: 7   KDNQSPQVQIAQILVEFLEVAITSIVFLKGVYPSDAFERRRYMNVVVHRARHPQLRDYIH 186
           K+NQSP    ++ILVEFLEVAITS+VFLKGVYPSDAFERRRYMNVVV RARHPQLRDYIH
Sbjct: 4   KNNQSPT---SRILVEFLEVAITSVVFLKGVYPSDAFERRRYMNVVVQRARHPQLRDYIH 60

Query: 187 SAVKGLQPFVEKGVVDRVAVIFFNNDNIPMERFVFNLAVSQSYKSNVEEIDLEFSLRSFL 366
           SAV GL PF++KG+V+RVAVIFFN DNIP+ERF+F LA+ QSY S VEE DLEFSLRSFL
Sbjct: 61  SAVSGLLPFIQKGLVERVAVIFFNTDNIPLERFIFKLAMDQSYGSKVEEGDLEFSLRSFL 120

Query: 367 VKLPVTEPLSKILPRDCRWEITAYFRALPQDNPRKEADLWIPTDTKQWDQP 519
           VKL V+E L+K+LPRDCRWEITAYFR+LP  +  K ADLWIPTDTKQW QP
Sbjct: 121 VKLSVSEGLTKVLPRDCRWEITAYFRSLPHVSTSKVADLWIPTDTKQWQQP 171


>ref|XP_003596189.1| Mitotic spindle assembly checkpoint protein MAD2B [Medicago
           truncatula] gi|355485237|gb|AES66440.1| Mitotic spindle
           assembly checkpoint protein MAD2B [Medicago truncatula]
          Length = 204

 Score =  256 bits (654), Expect = 1e-66
 Identities = 120/173 (69%), Positives = 146/173 (84%)
 Frame = +1

Query: 4   RKDNQSPQVQIAQILVEFLEVAITSIVFLKGVYPSDAFERRRYMNVVVHRARHPQLRDYI 183
           R++NQ+PQ QI ++LVEFLEVAITS+VFLKG+YP  AFER RYMNVVV RA HPQLR YI
Sbjct: 3   RRENQTPQGQIGRVLVEFLEVAITSVVFLKGIYPQGAFERARYMNVVVQRACHPQLRYYI 62

Query: 184 HSAVKGLQPFVEKGVVDRVAVIFFNNDNIPMERFVFNLAVSQSYKSNVEEIDLEFSLRSF 363
           H+ V GL PF++KG+V+RVAVIFFN DN+P+E+FVF LA++ SY S VEE+DL+ SLRSF
Sbjct: 63  HATVSGLLPFIQKGMVERVAVIFFNADNVPLEKFVFKLAMNLSYGSAVEEVDLQLSLRSF 122

Query: 364 LVKLPVTEPLSKILPRDCRWEITAYFRALPQDNPRKEADLWIPTDTKQWDQPP 522
           + KL ++E L+K LP DCRWEITAYFR++P+    KEADLWIPTDTKQW QPP
Sbjct: 123 MSKLSISESLTKKLPPDCRWEITAYFRSIPEAGTSKEADLWIPTDTKQWQQPP 175


>ref|XP_002513406.1| Mitotic spindle assembly checkpoint protein MAD2B, putative
           [Ricinus communis] gi|223547314|gb|EEF48809.1| Mitotic
           spindle assembly checkpoint protein MAD2B, putative
           [Ricinus communis]
          Length = 205

 Score =  254 bits (649), Expect = 5e-66
 Identities = 122/164 (74%), Positives = 141/164 (85%)
 Frame = +1

Query: 31  QIAQILVEFLEVAITSIVFLKGVYPSDAFERRRYMNVVVHRARHPQLRDYIHSAVKGLQP 210
           + A ILVEFLEVAITSIV +KGVYPS AFERRRYMNVVV RA+HPQLRDYIHSAV  L P
Sbjct: 11  ETASILVEFLEVAITSIVSIKGVYPSGAFERRRYMNVVVQRAKHPQLRDYIHSAVSSLLP 70

Query: 211 FVEKGVVDRVAVIFFNNDNIPMERFVFNLAVSQSYKSNVEEIDLEFSLRSFLVKLPVTEP 390
           F++KG+V+RVAVIF NNDNIP+ERF+F LAV+Q+Y  NVEE  LEFSLRSFL KL V+ P
Sbjct: 71  FIQKGLVERVAVIFLNNDNIPVERFIFKLAVNQAYGLNVEESGLEFSLRSFLKKLSVSAP 130

Query: 391 LSKILPRDCRWEITAYFRALPQDNPRKEADLWIPTDTKQWDQPP 522
           L++ILPRDCRWEITAYF ++P+    K+A+LWIPTDTKQW QPP
Sbjct: 131 LTRILPRDCRWEITAYFSSIPEVGTSKDAELWIPTDTKQWQQPP 174


Top