BLASTX nr result

ID: Cimicifuga21_contig00030657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030657
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX10441.1| 3-ketoacyl-CoA synthase 6 [Gossypium hirsutum]         114   1e-23
gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]         111   5e-23
ref|XP_004157020.1| PREDICTED: LOW QUALITY PROTEIN: 3-ketoacyl-C...   109   3e-22
ref|XP_004148222.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [...   109   3e-22
ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, parti...   107   1e-21

>gb|ABX10441.1| 3-ketoacyl-CoA synthase 6 [Gossypium hirsutum]
          Length = 467

 Score =  114 bits (284), Expect = 1e-23
 Identities = 47/66 (71%), Positives = 58/66 (87%)
 Frame = +3

Query: 99  WKWFDQWRDQACYIMHYECFKPSDDRKVDTEFCGDIIKRNKNLGINEYRFLLRAIVSSGL 278
           W W +  RDQ CYI+ Y+C+KPSDDR V TEFCG++IKRNKNLG+NEY+FLL+AIVSSG+
Sbjct: 20  WNWINNVRDQQCYILDYQCYKPSDDRMVGTEFCGEVIKRNKNLGLNEYKFLLKAIVSSGI 79

Query: 279 GEETYA 296
           GE+TYA
Sbjct: 80  GEQTYA 85


>gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]
          Length = 466

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/85 (57%), Positives = 62/85 (72%)
 Frame = +3

Query: 42  MEIFMXXXXXXXXXXXXXXWKWFDQWRDQACYIMHYECFKPSDDRKVDTEFCGDIIKRNK 221
           ME+F               WKW +  RDQ CYI+ Y+C+KP+DDR V TEF G++IKRNK
Sbjct: 1   MELFSFILLLPVLLVLLKIWKWVNDKRDQECYILDYQCYKPADDRMVGTEFSGEVIKRNK 60

Query: 222 NLGINEYRFLLRAIVSSGLGEETYA 296
           NLG+NEY+FLL+AIVSSG+GE+TYA
Sbjct: 61  NLGLNEYKFLLKAIVSSGIGEQTYA 85


>ref|XP_004157020.1| PREDICTED: LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 12-like
           [Cucumis sativus]
          Length = 461

 Score =  109 bits (272), Expect = 3e-22
 Identities = 45/65 (69%), Positives = 58/65 (89%)
 Frame = +3

Query: 99  WKWFDQWRDQACYIMHYECFKPSDDRKVDTEFCGDIIKRNKNLGINEYRFLLRAIVSSGL 278
           WK F+  +DQ CYI+ Y+C+KP+DDRK+ TEFCG+IIKR KNLG+NEY+FLL+A+VSSG+
Sbjct: 20  WKHFNDKQDQECYILSYQCYKPTDDRKLSTEFCGEIIKRTKNLGLNEYKFLLKAVVSSGI 79

Query: 279 GEETY 293
           GEETY
Sbjct: 80  GEETY 84


>ref|XP_004148222.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [Cucumis sativus]
          Length = 461

 Score =  109 bits (272), Expect = 3e-22
 Identities = 45/65 (69%), Positives = 58/65 (89%)
 Frame = +3

Query: 99  WKWFDQWRDQACYIMHYECFKPSDDRKVDTEFCGDIIKRNKNLGINEYRFLLRAIVSSGL 278
           WK F+  +DQ CYI+ Y+C+KP+DDRK+ TEFCG+IIKR KNLG+NEY+FLL+A+VSSG+
Sbjct: 20  WKHFNDKQDQECYILSYQCYKPTDDRKLSTEFCGEIIKRTKNLGLNEYKFLLKAVVSSGI 79

Query: 279 GEETY 293
           GEETY
Sbjct: 80  GEETY 84


>ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, partial [Vitis vinifera]
          Length = 556

 Score =  107 bits (267), Expect = 1e-21
 Identities = 44/65 (67%), Positives = 58/65 (89%)
 Frame = +3

Query: 99  WKWFDQWRDQACYIMHYECFKPSDDRKVDTEFCGDIIKRNKNLGINEYRFLLRAIVSSGL 278
           WK+ D  RDQ CYI+ Y+C+KP+DDRK+ TEFCGD+I+RNK+LG+ EY+FLL+AIV+SG+
Sbjct: 106 WKFIDGKRDQECYILDYQCYKPTDDRKLSTEFCGDMIRRNKSLGLQEYKFLLKAIVNSGI 165

Query: 279 GEETY 293
           GEETY
Sbjct: 166 GEETY 170


Top