BLASTX nr result

ID: Cimicifuga21_contig00030650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030650
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318752.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CAN70268.1| hypothetical protein VITISV_016147 [Vitis vinifera]    67   2e-09
ref|XP_002519247.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002312321.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002318752.1| predicted protein [Populus trichocarpa] gi|222859425|gb|EEE96972.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = -3

Query: 357 VEEVEAQMIVDFLREARSQISDAATLDGRSKKIIDAVIKIVMEDCYGSPKGDKGCSELVR 178
           VE +EA + V  L+EAR ++S++   D RSKK++DA+ K VM++ Y  P+     ++LV 
Sbjct: 131 VEGLEADVAVKLLKEARVEVSNS---DVRSKKVLDALTKAVMDEYYTLPEEKDWMTDLVS 187

Query: 177 LKVRIGLFCFVTWIVLVSVALF-FKSGSKTYFPGQLPT 67
           +K RI   CF+ W  +VS  LF F SG      G LPT
Sbjct: 188 MKWRIVCLCFLIWSFVVSTILFLFGSGLGGSAGGPLPT 225


>emb|CAN70268.1| hypothetical protein VITISV_016147 [Vitis vinifera]
          Length = 242

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/88 (32%), Positives = 59/88 (67%)
 Frame = -3

Query: 357 VEEVEAQMIVDFLREARSQISDAATLDGRSKKIIDAVIKIVMEDCYGSPKGDKGCSELVR 178
           +E +EA+++V+ L +AR+Q+ +++  D RSK+++D +IKI++++ Y  P        +V 
Sbjct: 131 IESLEAEIVVELLTQARAQVLNSSDTDIRSKRLLDTLIKIIIDETYLLPGQTDQFPGVVF 190

Query: 177 LKVRIGLFCFVTWIVLVSVALFFKSGSK 94
            + R+ + CF+ WI+ +SV  F +SG++
Sbjct: 191 ARTRLLMVCFLLWILTISVVSFIRSGAQ 218


>ref|XP_002519247.1| conserved hypothetical protein [Ricinus communis]
           gi|223541562|gb|EEF43111.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/94 (32%), Positives = 55/94 (58%)
 Frame = -3

Query: 348 VEAQMIVDFLREARSQISDAATLDGRSKKIIDAVIKIVMEDCYGSPKGDKGCSELVRLKV 169
           VE  ++ DFL++A +++ ++  +D +SKK++D ++K+V+++CY  P+      ELV  K+
Sbjct: 120 VEVDIVSDFLKQAGNRVLNSNDVDRQSKKLLDGLLKVVLDECYSLPEERDCYDELVSAKL 179

Query: 168 RIGLFCFVTWIVLVSVALFFKSGSKTYFPGQLPT 67
           RI   CF  W     +    +SGS   + G  PT
Sbjct: 180 RIVFLCFFIWSFASLIFFSLRSGSS--YSGLPPT 211


>ref|XP_002312321.1| predicted protein [Populus trichocarpa] gi|222852141|gb|EEE89688.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
 Frame = -3

Query: 390 LNFATDGRTSAVEEVEAQMIVDFLREARSQISDAATLDGRSKKIIDAVIKIVMEDCYGSP 211
           +N   + +   VE +EA ++V+ L++AR ++S A   D +SKK++DA+IK+V+++ Y + 
Sbjct: 122 VNKQCNSKIGQVEGLEADIVVNLLKQARIEVSKA---DVQSKKLLDALIKVVIDEFY-TL 177

Query: 210 KGDKGCSE-LVRLKVRIGLFCFVTWIVLVSVALFFKSGSKTYFPGQLPT 67
            G+K  +   V +K R+   CF+ W   VS  L F  G  +   G  PT
Sbjct: 178 TGEKDLTNCFVSMKGRVVCLCFLIWSFAVSGFLLFDLGLGSSGGGPPPT 226


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