BLASTX nr result

ID: Cimicifuga21_contig00030620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030620
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331376.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002312500.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002336894.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002332934.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002331376.1| predicted protein [Populus trichocarpa] gi|222874414|gb|EEF11545.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/96 (43%), Positives = 56/96 (58%)
 Frame = +1

Query: 10  STSNSKRIPQHSLVTHGKIEVTKFTGKNNFALWKGEVMDALVSEDLIEALDEERADDLTE 189
           S  N+   PQ+  V++ K EV KF GK NF +WK EVMD LV  +L   L E++ +DL +
Sbjct: 9   SAGNASIPPQYIPVSNTKFEVEKFDGKGNFGMWKCEVMDMLVQMNLDFTL-EDKPEDLDD 67

Query: 190 KEWKYLNLKACGSIRKYLCDSIRYAMLPETSAFVLW 297
           K W+ +N  AC SIR  L    +YA   + SA  LW
Sbjct: 68  KSWERINRLACSSIRLCLVKDQKYAFSEQNSAKELW 103


>ref|XP_002312500.1| predicted protein [Populus trichocarpa] gi|222852320|gb|EEE89867.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/96 (43%), Positives = 55/96 (57%)
 Frame = +1

Query: 10  STSNSKRIPQHSLVTHGKIEVTKFTGKNNFALWKGEVMDALVSEDLIEALDEERADDLTE 189
           S  N+   PQ+  V+  K EV KF GK NF +WK EVMD LV  +L   L E++ +DL +
Sbjct: 9   SAGNASIPPQYIPVSSTKFEVEKFDGKCNFGMWKCEVMDMLVQMNLDFTL-EDKPEDLDD 67

Query: 190 KEWKYLNLKACGSIRKYLCDSIRYAMLPETSAFVLW 297
           K W+ +N  AC SIR  L    +YA   + SA  LW
Sbjct: 68  KSWERINRLACSSIRLCLVKDQKYAFSEQNSAKELW 103


>ref|XP_002336894.1| predicted protein [Populus trichocarpa] gi|222837079|gb|EEE75458.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = +1

Query: 10  STSNSKRIPQHSLVTHGKIEVTKFTGKNNFALWKGEVMDALVSEDLIEALDEERADDLTE 189
           S  N+   PQ+  +++ K EV KF GK NF +WK EVMD LV  +L   L E++ +DL +
Sbjct: 9   SAGNASIPPQYIPISNTKFEVEKFDGKGNFGMWKCEVMDMLVQMNLDFTL-EDKPEDLDD 67

Query: 190 KEWKYLNLKACGSIRKYLCDSIRYAMLPETSAFVLW 297
           K W+ +N  AC SIR  L    +YA   +  A  LW
Sbjct: 68  KSWERMNRLACSSIRLCLVKDQKYAFSEQNFAKELW 103


>ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|222856674|gb|EEE94221.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/93 (41%), Positives = 52/93 (55%)
 Frame = +1

Query: 19  NSKRIPQHSLVTHGKIEVTKFTGKNNFALWKGEVMDALVSEDLIEALDEERADDLTEKEW 198
           N+   PQ+  V+  K EV KF GK NF +WK E MD LV  +L   L E++ +DL +K W
Sbjct: 12  NASIPPQYIPVSSTKFEVEKFDGKGNFGMWKCEDMDMLVQINLDFTL-EDKPEDLDDKSW 70

Query: 199 KYLNLKACGSIRKYLCDSIRYAMLPETSAFVLW 297
           + +N  AC SIR  L    +Y    + SA  LW
Sbjct: 71  ERINWLACSSIRLCLVKDQKYTFSEQNSAKKLW 103


>ref|XP_002332934.1| predicted protein [Populus trichocarpa]
           gi|224162009|ref|XP_002338401.1| predicted protein
           [Populus trichocarpa] gi|222835560|gb|EEE73995.1|
           predicted protein [Populus trichocarpa]
           gi|222872081|gb|EEF09212.1| predicted protein [Populus
           trichocarpa]
          Length = 88

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/75 (48%), Positives = 46/75 (61%)
 Frame = +1

Query: 10  STSNSKRIPQHSLVTHGKIEVTKFTGKNNFALWKGEVMDALVSEDLIEALDEERADDLTE 189
           S  N+   PQ+  V+  K EV KF GK NF +WK EVMD LV  +L   L E++ +DL +
Sbjct: 9   SAGNASIPPQYIPVSSTKFEVEKFDGKANFNMWKREVMDMLVQMNLDFTL-EDKPEDLDD 67

Query: 190 KEWKYLNLKACGSIR 234
           K WK +N  AC SIR
Sbjct: 68  KNWKRINQLACSSIR 82


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