BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030538
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   6e-13
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    76   3e-12
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   5e-12
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   2e-11
emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]    70   2e-10

>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
 Frame = -3

Query: 432 GPKPFKFQAFWINHPDYPGAVHNAWESTFIRNQLFSLPDKIKNTKHRLIPWNKETFGDLR 253
           GPKPF+F   W++HP++   +  AW +     Q   LPDK+K  K +L  WNK  FG + 
Sbjct: 235 GPKPFRFLNCWVSHPNFLPTISLAWANA----QNLPLPDKLKQLKLKLKEWNKSEFGAID 290

Query: 252 CRIVEIT------KDIAAIEALPSTLDNLDKEKQVKKLLDLTLSAEEIFWKQKSRDKWIP 91
            +I E+        DIA    L  +   LD  K V+  L   L   E +W Q SR KW+ 
Sbjct: 291 TKIKELEDLIQHFDDIANDRTLSDS--ELDSRKSVQMDLWSWLKKREAYWAQVSRSKWLK 348

Query: 90  MGFERKQKKFMPLLSVSANLSKSSAL 13
            G +R  K F  L S+    +  S++
Sbjct: 349 EG-DRNTKFFHTLASIRRQKNSISSI 373


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
 Frame = -3

Query: 426  KPFKFQAFWINHPDYPGAVHNAWESTFIRNQLFSLPDKIKNTKHRLIPWNKETFGDLRCR 247
            +PF+F+A W+ H  +   +  +W      N     P  +   K +L  WN+E FGD+  R
Sbjct: 655  RPFRFEAAWLTHSGFKDLLQASW------NTEGETPVALAALKSKLKKWNREVFGDVNRR 708

Query: 246  IVEITKDIAAIEALP--STLDNL-DKEKQVKKLLDLTLSAEEIFWKQKSRDKWIPMGFER 76
               +  +I  ++ L   +  DNL  KE+++ K  D+ L  EE+ W QKSR+KW+ +G +R
Sbjct: 709  KESLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREKWVELG-DR 767

Query: 75   KQKKFMPLLSVSANLSKSSALK 10
              K F  +  V    ++   LK
Sbjct: 768  NTKYFHTMTVVRRRRNRIEMLK 789


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
 Frame = -3

Query: 432 GPKPFKFQAFWINHPDYPGAVHNAWESTFIRNQLFSLPDKIKNTKHRLIPWNKETFGDLR 253
           GPKPFKFQ  W++ P     V + W+    ++    L  K+K  K  L  WN++ FG++ 
Sbjct: 235 GPKPFKFQNCWLSDPRCMRLVKDTWQ----KSSPMGLVQKLKTVKKDLKDWNEKVFGNIE 290

Query: 252 CRIVEITKDIAAIEALPS--TLDNLDKEKQVKKLLDL--TLSAEEIFWKQKSRDKWIPMG 85
             I ++  +I  ++ + +   LD+ + EK+ K  +DL   +  +E +W Q+SR KW+  G
Sbjct: 291 ANIKQLEHEINQLDKISNERDLDSFELEKKKKAQVDLWSWMKTKESYWSQQSRIKWLKQG 350

Query: 84  FERKQKKFMPLLSVSANLSKSSALK 10
            +R  K F  + S+  + +  ++++
Sbjct: 351 -DRNTKFFHVVASIRKHRNSITSIE 374


>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
 Frame = -3

Query: 432 GPKPFKFQAFWINHPDYPGAVHNAWESTFIRNQLFSLPDKIKNTKHRLIPWNKETFGDLR 253
           GP+PF+FQ  W++HP     + + W S    N    L DK+K TK RL  WN   FG + 
Sbjct: 235 GPRPFRFQNCWLSHPGCLQIIKDVWASHTSGN----LTDKLKETKKRLKIWNSSEFGHID 290

Query: 252 CRIVEITKDIAAIEALPS----TLDNLDKEKQVKKLLDLTLSAEEIFWKQKSRDKWIPMG 85
             I E+   I  ++ + +     L+ L + +  +  L + L  +E FW Q SR KWI  G
Sbjct: 291 RNIEELEDRIHNLDLISNGRDLQLEELAERRSSQMELWVWLRRKEAFWAQNSRAKWIKEG 350

Query: 84  FERKQKKFMPLLSVSANLSKSSALKT 7
            ++  K F  L S     +   AL T
Sbjct: 351 -DKNTKYFHTLASTRKKKNTIPALIT 375


>emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]
          Length = 1198

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
 Frame = -3

Query: 432  GPKPFKFQAFWINHPDYPGAVHNAWESTFIRN-QLFSLPDKIKNTKHRLIPWNKETFGDL 256
            GP PF+F+  W+ HP++     + W+   +   +      K+K  K +L  WN   FGDL
Sbjct: 873  GPTPFRFENMWLLHPEFKEKFRDWWQECXVEXWEXHKFMRKLKFIKSKLXEWNIVVFGDL 932

Query: 255  RCRIVEITKDIAAIEALPS----TLDNLDKEKQVKKLLDLTLSAEEIFWKQKSRDKWIPM 88
            R R   I  D+  I+ +       LD + +    +K L+  L  EE+ W+ KSR KWI  
Sbjct: 933  RERKKHILXDLGRIDRIEQEGNLNLDLVSERTLRRKELEDLLLKEEVQWRXKSRVKWIKE 992

Query: 87   G 85
            G
Sbjct: 993  G 993