BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030493
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   125   5e-27
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              122   2e-26

>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/107 (58%), Positives = 78/107 (72%)
 Frame = +1

Query: 1   AKLSVTPDEYSYSIAIQALCTMGKLDSALSLLDEMEKKGLRPNLIIFNTLLIAFYDNGRF 180
           +KLSV PD  SY+I I  LC MG +DSA+ +LDEMEKK L P+LI FNTLL   Y +GRF
Sbjct: 157 SKLSVEPDLVSYNIVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRF 216

Query: 181 LDGERIWARIEKKEIVPDIISYNSKL*GLVQAGKTSEAAKLIEALKT 321
           LDGE+IW R+EKK I+PDI SYN+KL GLV   +  E   L+E ++T
Sbjct: 217 LDGEKIWGRMEKKNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQT 263


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/108 (59%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   AKLSVTPDEYSYSIAIQALCTMGKLDSALSLLDEMEKKGLRPNLIIFNTLLIAFYDNGRF 180
           +KLSV PD  SY+I I+ LC MG +DSA+ +LDEMEKK L P+LI FNTLL   Y +GRF
Sbjct: 157 SKLSVEPDLVSYNIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRF 216

Query: 181 LDGERIWARIEKKEIVPDIISYNSKL*GLVQAGKTS-EAAKLIEALKT 321
           LDGE+IW R+EKK I+PDI SYN+KL GLV + K   E   L+E ++T
Sbjct: 217 LDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQT 264



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/99 (28%), Positives = 51/99 (51%)
 Frame = +1

Query: 13  VTPDEYSYSIAIQALCTMGKLDSALSLLDEMEKKGLRPNLIIFNTLLIAFYDNGRFLDGE 192
           + PD YS++  I+  C  GK+D A +   +M +    P+ + F TL+  + + G F    
Sbjct: 267 IKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAF 326

Query: 193 RIWARIEKKEIVPDIISYNSKL*GLVQAGKTSEAAKLIE 309
            +   I  ++ + D +   + + GLV+ GK  EA KL++
Sbjct: 327 ELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQ 365


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/108 (59%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   AKLSVTPDEYSYSIAIQALCTMGKLDSALSLLDEMEKKGLRPNLIIFNTLLIAFYDNGRF 180
           +KLSV PD  SY+I I+ LC MG +DSA+ +LDEMEKK L P+LI FNTLL   Y +GRF
Sbjct: 157 SKLSVEPDLVSYNIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRF 216

Query: 181 LDGERIWARIEKKEIVPDIISYNSKL*GLVQAGKTS-EAAKLIEALKT 321
           LDGE+IW R+EKK I+PDI SYN+KL GLV + K   E   L+E ++T
Sbjct: 217 LDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQT 264



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/99 (28%), Positives = 51/99 (51%)
 Frame = +1

Query: 13  VTPDEYSYSIAIQALCTMGKLDSALSLLDEMEKKGLRPNLIIFNTLLIAFYDNGRFLDGE 192
           + PD YS++  I+  C  GK+D A +   +M +    P+ + F TL+  + + G F    
Sbjct: 267 IKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAF 326

Query: 193 RIWARIEKKEIVPDIISYNSKL*GLVQAGKTSEAAKLIE 309
            +   I  ++ + D +   + + GLV+ GK  EA KL++
Sbjct: 327 ELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQ 365


>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13150-like [Vitis vinifera]
          Length = 379

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/105 (55%), Positives = 76/105 (72%)
 Frame = +1

Query: 7   LSVTPDEYSYSIAIQALCTMGKLDSALSLLDEMEKKGLRPNLIIFNTLLIAFYDNGRFLD 186
           L V PD  SY+I + A C MG LDSALS+LDEMEK GL P+LI FNTLL AFY NG + D
Sbjct: 157 LGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYAD 216

Query: 187 GERIWARIEKKEIVPDIISYNSKL*GLVQAGKTSEAAKLIEALKT 321
           GE+IW  ++K  + P++ SYN+KL G++   + SEA +LI+ +KT
Sbjct: 217 GEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKT 261


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/105 (55%), Positives = 76/105 (72%)
 Frame = +1

Query: 7   LSVTPDEYSYSIAIQALCTMGKLDSALSLLDEMEKKGLRPNLIIFNTLLIAFYDNGRFLD 186
           L V PD  SY+I + A C MG LDSALS+LDEMEK GL P+LI FNTLL AFY NG + D
Sbjct: 167 LGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYAD 226

Query: 187 GERIWARIEKKEIVPDIISYNSKL*GLVQAGKTSEAAKLIEALKT 321
           GE+IW  ++K  + P++ SYN+KL G++   + SEA +LI+ +KT
Sbjct: 227 GEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKT 271