BLASTX nr result

ID: Cimicifuga21_contig00030290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030290
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...    47   5e-06

>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score = 46.6 bits (109), Expect(2) = 5e-06
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 138 SEDVVLRPMAKKMDEKLEKYC-KFESLNLILVVAIVLDPRYKMDYVEFWYTSFLKKCACL 314
           SEDV LR MA++M  K +KY   ++SLN++L+VA+V DPR K+   ++    F       
Sbjct: 449 SEDVHLRSMAQRMKLKYDKYWGNYKSLNMMLLVALVFDPRRKVRLADWMIRRFYN----- 503

Query: 315 EDDEELNVEDTQKVNFFVKKLKTLIDQLYAHY 410
           EDD +            +  L++ +  LY  Y
Sbjct: 504 EDDSDA----------LIAMLESCLKSLYEEY 525



 Score = 28.5 bits (62), Expect(2) = 5e-06
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 13  KRIEKTLHVFLEDVY*ITKRVSGSKYVTSNTF 108
           KR+ + L  FL+  Y  T R+SGS Y+TSN +
Sbjct: 402 KRVREILP-FLKMFYDATVRISGSSYLTSNIY 432


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