BLASTX nr result

ID: Cimicifuga21_contig00030103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030103
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|2...   189   2e-46
ref|XP_003533056.1| PREDICTED: cyclin-A2-4-like [Glycine max]         187   1e-45
dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]                     182   3e-44
ref|XP_004167304.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-A2-4-...   181   5e-44
ref|XP_004135827.1| PREDICTED: cyclin-A2-4-like [Cucumis sativus]     181   5e-44

>ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera]
           gi|297743331|emb|CBI36198.3| unnamed protein product
           [Vitis vinifera]
          Length = 490

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/117 (78%), Positives = 101/117 (86%)
 Frame = +1

Query: 1   QASYKAPSLELEFLANYLAELTLVEYGFLKLLPSLVAASAIFLARWTLNQSSHPWNPTLE 180
           QASYK PSLELE+L NYLAELTL++YG LK LPS++AASA+FLARWTL+QS HPWNPTLE
Sbjct: 374 QASYKNPSLELEYLGNYLAELTLIDYGCLKYLPSIIAASAVFLARWTLDQSGHPWNPTLE 433

Query: 181 HYTSYKASDLKCTVPALQDLQKNTTGCPLNAIRDKYRQEKFKCVASLPSPKVFQMLF 351
           HYT YKASDLK  V ALQDLQ NT+GCPLNAIR KYRQ KFK VASL SPK+ Q LF
Sbjct: 434 HYTRYKASDLKTAVFALQDLQLNTSGCPLNAIRGKYRQNKFKSVASLSSPKLLQTLF 490


>ref|XP_003533056.1| PREDICTED: cyclin-A2-4-like [Glycine max]
          Length = 481

 Score =  187 bits (475), Expect = 1e-45
 Identities = 88/117 (75%), Positives = 102/117 (87%)
 Frame = +1

Query: 1   QASYKAPSLELEFLANYLAELTLVEYGFLKLLPSLVAASAIFLARWTLNQSSHPWNPTLE 180
           QASYK  SLELE+LANYLAELTL++YGFL  LPS++AASA+FLARWTL+QS+HPWNPTL+
Sbjct: 365 QASYKDQSLELEYLANYLAELTLMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLQ 424

Query: 181 HYTSYKASDLKCTVPALQDLQKNTTGCPLNAIRDKYRQEKFKCVASLPSPKVFQMLF 351
           HY  YKASDLK TV ALQDLQ NT GCPL A+R KYRQ+KFKCVA+L SPK+ + LF
Sbjct: 425 HYACYKASDLKTTVLALQDLQLNTDGCPLTAVRTKYRQDKFKCVAALSSPKLLETLF 481


>dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]
          Length = 493

 Score =  182 bits (462), Expect = 3e-44
 Identities = 88/117 (75%), Positives = 101/117 (86%)
 Frame = +1

Query: 1   QASYKAPSLELEFLANYLAELTLVEYGFLKLLPSLVAASAIFLARWTLNQSSHPWNPTLE 180
           QASYK PS+ELEF+ANYLAELTLV+YGFLK LPSL AASA+FLARWTL+QS+HPWNPTLE
Sbjct: 377 QASYKVPSVELEFMANYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQSNHPWNPTLE 436

Query: 181 HYTSYKASDLKCTVPALQDLQKNTTGCPLNAIRDKYRQEKFKCVASLPSPKVFQMLF 351
           HYT YK S+L+ TV ALQ+LQ NT+GC LNAIR+KYRQ KFK VA+L + K  Q LF
Sbjct: 437 HYTRYKVSELRTTVFALQELQMNTSGCTLNAIREKYRQPKFKSVATLAASKPVQSLF 493


>ref|XP_004167304.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-A2-4-like [Cucumis sativus]
          Length = 503

 Score =  181 bits (460), Expect = 5e-44
 Identities = 88/117 (75%), Positives = 101/117 (86%)
 Frame = +1

Query: 1   QASYKAPSLELEFLANYLAELTLVEYGFLKLLPSLVAASAIFLARWTLNQSSHPWNPTLE 180
           Q +YK PSLELE LANYLAELTLV+YGFL  LPS++AASA+FL++WTL+QSSHPWN TLE
Sbjct: 387 QTTYKTPSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWTLDQSSHPWNSTLE 446

Query: 181 HYTSYKASDLKCTVPALQDLQKNTTGCPLNAIRDKYRQEKFKCVASLPSPKVFQMLF 351
           +YTSYKASDLK TV ALQDLQ NT GCPL++IR KYRQEKFK VA+L SPK+   LF
Sbjct: 447 YYTSYKASDLKQTVVALQDLQLNTNGCPLSSIRVKYRQEKFKAVATLSSPKLLDTLF 503


>ref|XP_004135827.1| PREDICTED: cyclin-A2-4-like [Cucumis sativus]
          Length = 503

 Score =  181 bits (460), Expect = 5e-44
 Identities = 88/117 (75%), Positives = 101/117 (86%)
 Frame = +1

Query: 1   QASYKAPSLELEFLANYLAELTLVEYGFLKLLPSLVAASAIFLARWTLNQSSHPWNPTLE 180
           Q +YK PSLELE LANYLAELTLV+YGFL  LPS++AASA+FL++WTL+QSSHPWN TLE
Sbjct: 387 QTTYKTPSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWTLDQSSHPWNSTLE 446

Query: 181 HYTSYKASDLKCTVPALQDLQKNTTGCPLNAIRDKYRQEKFKCVASLPSPKVFQMLF 351
           +YTSYKASDLK TV ALQDLQ NT GCPL++IR KYRQEKFK VA+L SPK+   LF
Sbjct: 447 YYTSYKASDLKQTVVALQDLQLNTNGCPLSSIRVKYRQEKFKAVATLSSPKLLDTLF 503


Top