BLASTX nr result

ID: Cimicifuga21_contig00028997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028997
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526340.1| LOB domain-containing protein, putative [Ric...   177   6e-43
ref|XP_002282070.1| PREDICTED: LOB domain-containing protein 11 ...   174   7e-42
ref|XP_002315279.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
gb|ADU54137.1| lateral organ boundaries domain 1 [Populus tremul...   166   2e-39
gb|AFK47293.1| unknown [Lotus japonicus]                              166   2e-39

>ref|XP_002526340.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223534299|gb|EEF36011.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 201

 Score =  177 bits (450), Expect = 6e-43
 Identities = 94/134 (70%), Positives = 104/134 (77%), Gaps = 4/134 (2%)
 Frame = +1

Query: 4   KFTTAHRVFGASNIIKFLQELPECERADAVSSMVYEANARIRDPVYGSAGVISHLQKQVN 183
           KFT AHRVFGASNIIKFLQELPE +RADAVSSMVYEA+ARIRDPVYG AG I  LQKQVN
Sbjct: 68  KFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVN 127

Query: 184 DLQVQLAMTQAELVNIQCQNANL-TLIYMGMVQSPQTSSEQIFQNSVV---DYPCNGGFL 351
           +LQ QLA  QAE+VN+QCQ ANL  LIYM M QSPQ SSEQ   + +     Y  N  FL
Sbjct: 128 ELQAQLAKAQAEVVNMQCQQANLMALIYMEMAQSPQQSSEQSIDDFITTPQSYQSNPCFL 187

Query: 352 DDSNVCSSWEPLWT 393
           D+SN+ + WEPLWT
Sbjct: 188 DESNLGTMWEPLWT 201


>ref|XP_002282070.1| PREDICTED: LOB domain-containing protein 11 [Vitis vinifera]
           gi|297746208|emb|CBI16264.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  174 bits (441), Expect = 7e-42
 Identities = 93/135 (68%), Positives = 104/135 (77%), Gaps = 5/135 (3%)
 Frame = +1

Query: 4   KFTTAHRVFGASNIIKFLQELPECERADAVSSMVYEANARIRDPVYGSAGVISHLQKQVN 183
           KFTTAHRVFGASNIIKFLQELPE +RADAVSSMVYEA ARIRDPVYG AG I  LQKQ++
Sbjct: 68  KFTTAHRVFGASNIIKFLQELPEFQRADAVSSMVYEAQARIRDPVYGCAGAICQLQKQLD 127

Query: 184 DLQVQLAMTQAELVNIQCQNANLTLIY---MGMVQSPQTSSEQIFQN--SVVDYPCNGGF 348
           +LQ QLA TQAELVN+QCQ ANL  +    M M QSPQ SSE+   +  S   Y  N  F
Sbjct: 128 ELQAQLAKTQAELVNMQCQQANLVTMICMEMEMSQSPQPSSEESLDSLISPQSYQSNSFF 187

Query: 349 LDDSNVCSSWEPLWT 393
           LDDSN+ ++WEPLWT
Sbjct: 188 LDDSNIGATWEPLWT 202


>ref|XP_002315279.1| predicted protein [Populus trichocarpa] gi|222864319|gb|EEF01450.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  168 bits (425), Expect = 5e-40
 Identities = 92/131 (70%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = +1

Query: 4   KFTTAHRVFGASNIIKFLQELPECERADAVSSMVYEANARIRDPVYGSAGVISHLQKQVN 183
           KFT AHRVFGASNIIKFLQELPE +RADAVSSMVYEANARIRDPVYG AG IS LQKQV+
Sbjct: 88  KFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAISQLQKQVS 147

Query: 184 DLQVQLAMTQAELVNIQCQNANL-TLIYMGMVQSPQTSSEQIFQNSVVDYPCNGGFLDDS 360
           DLQ QLA  QAE+VN+QCQ ANL  L+ M M QS Q    Q  Q+  VD  C   FLD++
Sbjct: 148 DLQAQLAKAQAEVVNMQCQQANLVALLCMEMTQSQQEPILQ--QHQYVDTSC---FLDEN 202

Query: 361 NVCSSWEPLWT 393
           N+ +SWEPLWT
Sbjct: 203 NLGTSWEPLWT 213


>gb|ADU54137.1| lateral organ boundaries domain 1 [Populus tremula x Populus alba]
          Length = 219

 Score =  166 bits (420), Expect = 2e-39
 Identities = 91/131 (69%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = +1

Query: 4   KFTTAHRVFGASNIIKFLQELPECERADAVSSMVYEANARIRDPVYGSAGVISHLQKQVN 183
           KFT AHRVFGASNIIKFLQELPE +RADAVSSMVYEANARIRDPVYG AG IS LQKQV+
Sbjct: 94  KFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAISQLQKQVS 153

Query: 184 DLQVQLAMTQAELVNIQCQNANL-TLIYMGMVQSPQTSSEQIFQNSVVDYPCNGGFLDDS 360
           DLQ QLA  QAE+V++QCQ ANL  L+ M M QS Q    Q  Q+  VD  C   FLD++
Sbjct: 154 DLQAQLAKAQAEVVSMQCQQANLVALLCMEMTQSQQEPILQ--QHQYVDTSC---FLDEN 208

Query: 361 NVCSSWEPLWT 393
           N+ +SWEPLWT
Sbjct: 209 NLGTSWEPLWT 219


>gb|AFK47293.1| unknown [Lotus japonicus]
          Length = 223

 Score =  166 bits (419), Expect = 2e-39
 Identities = 91/134 (67%), Positives = 102/134 (76%), Gaps = 3/134 (2%)
 Frame = +1

Query: 1   LKFTTAHRVFGASNIIKFLQELPECERADAVSSMVYEANARIRDPVYGSAGVISHLQKQV 180
           LKFT AHRVFGASNIIKFLQELPE +RADAVSSMVYEANARIRDPVYG AG I  LQKQV
Sbjct: 93  LKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQV 152

Query: 181 NDLQVQLAMTQAELVNIQCQNAN-LTLIYMGM--VQSPQTSSEQIFQNSVVDYPCNGGFL 351
           ++LQ QLA  QAE+VN+QCQ+AN L LI M M   QSP+     I   + VD  C   FL
Sbjct: 153 SELQAQLAKAQAEMVNMQCQHANLLALICMEMTQTQSPEQQQNIIQPQTHVDMSC---FL 209

Query: 352 DDSNVCSSWEPLWT 393
           +D+N  S+WEPLWT
Sbjct: 210 EDNNFGSAWEPLWT 223


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