BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028987
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containi...   371   e-101
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   363   1e-98
ref|XP_003614163.1| Pentatricopeptide repeat-containing protein ...   357   1e-96
ref|XP_003614110.1| Pentatricopeptide repeat-containing protein ...   357   1e-96

>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
            [Vitis vinifera]
          Length = 655

 Score =  379 bits (974), Expect = e-103
 Identities = 178/212 (83%), Positives = 202/212 (95%)
 Frame = -2

Query: 658  SNQDFQSAFSLFRDMREAKISDLQVSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEMGT 479
            S+QDFQSAFSLFRDMREA++ D++ SYLT+MTGLTENHRPELMAAFLDE+VEDPR+E+GT
Sbjct: 443  SSQDFQSAFSLFRDMREARVPDMKGSYLTMMTGLTENHRPELMAAFLDEIVEDPRVEVGT 502

Query: 478  HDWNSIIHAFCKIGRLEDARRTLRRMVFLRFEPNGQTYLSLINGYVTAEKYFSVLILWTE 299
            HDWNSIIHAFCK+GRLEDARRT RRM+FL+FEPN QTYLSLINGY +AEKYFSVL+LW E
Sbjct: 503  HDWNSIIHAFCKVGRLEDARRTFRRMIFLQFEPNDQTYLSLINGYASAEKYFSVLMLWNE 562

Query: 298  VRKRISIDSEKGLKLDHSLVDAFLYALVKGGFFDAVMQVAEKAQEMRIFVDKWRHKQAFM 119
            V++RISID EKG+K DH+LVDAFLYALVKGGFFDAVMQV EK+QEM+IFVDKWR+KQAFM
Sbjct: 563  VKRRISIDGEKGVKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRYKQAFM 622

Query: 118  ETHKKLKVAKLRKRNYRKMEALVAFKNWAGLN 23
            E HKKLKVAK+RKRN+RKMEAL+AFKNWAGLN
Sbjct: 623  EVHKKLKVAKVRKRNFRKMEALIAFKNWAGLN 654


>ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like
            [Glycine max]
          Length = 624

 Score =  371 bits (952), Expect = e-101
 Identities = 176/210 (83%), Positives = 197/210 (93%)
 Frame = -2

Query: 652  QDFQSAFSLFRDMREAKISDLQVSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEMGTHD 473
            QDFQSAFSLFRDMR+A+I DL+ SYLTIMTGL ENHRPELMAAFLDEVVEDPRIE+GTHD
Sbjct: 414  QDFQSAFSLFRDMRDARIPDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHD 473

Query: 472  WNSIIHAFCKIGRLEDARRTLRRMVFLRFEPNGQTYLSLINGYVTAEKYFSVLILWTEVR 293
            WNSIIHAFCK GRLEDARRT RRM+FL+FEPN QTYLS+INGYV AEKYF VL+LW EV+
Sbjct: 474  WNSIIHAFCKAGRLEDARRTFRRMMFLQFEPNDQTYLSMINGYVLAEKYFLVLMLWNEVK 533

Query: 292  KRISIDSEKGLKLDHSLVDAFLYALVKGGFFDAVMQVAEKAQEMRIFVDKWRHKQAFMET 113
            +++S+D +KG+K DH+LVDAFLYA+VKGGFFDAVMQV EKA EMR+FVDKWR+KQAFMET
Sbjct: 534  RKLSLDGQKGIKFDHNLVDAFLYAMVKGGFFDAVMQVVEKAYEMRVFVDKWRYKQAFMET 593

Query: 112  HKKLKVAKLRKRNYRKMEALVAFKNWAGLN 23
            HKKLKVAKLRKRN+RKMEAL+AFKNWAGLN
Sbjct: 594  HKKLKVAKLRKRNFRKMEALIAFKNWAGLN 623


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  363 bits (933), Expect = 1e-98
 Identities = 173/212 (81%), Positives = 197/212 (92%)
 Frame = -2

Query: 658  SNQDFQSAFSLFRDMREAKISDLQVSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEMGT 479
            ++QDFQSAF+LFRDMRE++  DL+ SYLTIMTGL ENHRPELMAAFLDEVVEDPRIE+ T
Sbjct: 438  TSQDFQSAFTLFRDMRESRSPDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVKT 497

Query: 478  HDWNSIIHAFCKIGRLEDARRTLRRMVFLRFEPNGQTYLSLINGYVTAEKYFSVLILWTE 299
            HDWNSIIHAFCK GRLEDA+RT RRM+FL+FEPN QTYLSLINGYVTAEKYFSVL+LW+E
Sbjct: 498  HDWNSIIHAFCKAGRLEDAKRTFRRMIFLQFEPNDQTYLSLINGYVTAEKYFSVLMLWSE 557

Query: 298  VRKRISIDSEKGLKLDHSLVDAFLYALVKGGFFDAVMQVAEKAQEMRIFVDKWRHKQAFM 119
            +++R+S D EK  K D +LVDAFLYALVKGGFFDAVMQV EK+QEM+IFVDKW++KQAFM
Sbjct: 558  IKRRVSNDKEKSFKFDQNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWKYKQAFM 617

Query: 118  ETHKKLKVAKLRKRNYRKMEALVAFKNWAGLN 23
            ETHKKLKV+KLRKRN+RKMEAL+AFKNWAGLN
Sbjct: 618  ETHKKLKVSKLRKRNFRKMEALIAFKNWAGLN 649


>ref|XP_003614163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355515498|gb|AES97121.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 660

 Score =  357 bits (916), Expect = 1e-96
 Identities = 170/212 (80%), Positives = 193/212 (91%)
 Frame = -2

Query: 658  SNQDFQSAFSLFRDMREAKISDLQVSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEMGT 479
            S QDFQS FSLFRDMR A++ DL+ SYLTIMTGL ENHRPELMAAFLDEVVEDPRIE+GT
Sbjct: 448  SGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGT 507

Query: 478  HDWNSIIHAFCKIGRLEDARRTLRRMVFLRFEPNGQTYLSLINGYVTAEKYFSVLILWTE 299
            HDWNSIIHAFCK GRLEDARRT RRM FL+FEPN QTYLSLINGYV+AEKYF V++LW E
Sbjct: 508  HDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVSAEKYFDVMMLWNE 567

Query: 298  VRKRISIDSEKGLKLDHSLVDAFLYALVKGGFFDAVMQVAEKAQEMRIFVDKWRHKQAFM 119
            V+++++ D  KG+K D +LVDAFLYA+VKGGFFDAVMQV EK++EM+IFVDKWR+KQAFM
Sbjct: 568  VKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFM 627

Query: 118  ETHKKLKVAKLRKRNYRKMEALVAFKNWAGLN 23
            ETHKKLKVA+LRK+N RKMEAL+AFKNWAGLN
Sbjct: 628  ETHKKLKVARLRKKNVRKMEALIAFKNWAGLN 659


>ref|XP_003614110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355515445|gb|AES97068.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 664

 Score =  357 bits (916), Expect = 1e-96
 Identities = 170/212 (80%), Positives = 193/212 (91%)
 Frame = -2

Query: 658  SNQDFQSAFSLFRDMREAKISDLQVSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEMGT 479
            S QDFQS FSLFRDMR A++ DL+ SYLTIMTGL ENHRPELMAAFLDEVVEDPRIE+GT
Sbjct: 452  SGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGT 511

Query: 478  HDWNSIIHAFCKIGRLEDARRTLRRMVFLRFEPNGQTYLSLINGYVTAEKYFSVLILWTE 299
            HDWNSIIHAFCK GRLEDARRT RRM FL+FEPN QTYLSLINGYV+AEKYF V++LW E
Sbjct: 512  HDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVSAEKYFDVMMLWNE 571

Query: 298  VRKRISIDSEKGLKLDHSLVDAFLYALVKGGFFDAVMQVAEKAQEMRIFVDKWRHKQAFM 119
            V+++++ D  KG+K D +LVDAFLYA+VKGGFFDAVMQV EK++EM+IFVDKWR+KQAFM
Sbjct: 572  VKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFM 631

Query: 118  ETHKKLKVAKLRKRNYRKMEALVAFKNWAGLN 23
            ETHKKLKVA+LRK+N RKMEAL+AFKNWAGLN
Sbjct: 632  ETHKKLKVARLRKKNVRKMEALIAFKNWAGLN 663