BLASTX nr result

ID: Cimicifuga21_contig00028979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028979
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312675.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-31
emb|CAN65937.1| hypothetical protein VITISV_008966 [Vitis vinifera]   112   1e-30
ref|XP_002527929.1| conserved hypothetical protein [Ricinus comm...   115   6e-30
ref|XP_002271910.2| PREDICTED: uncharacterized protein LOC100242...   123   1e-26
emb|CBI18645.3| unnamed protein product [Vitis vinifera]              118   6e-25

>ref|XP_002312675.1| predicted protein [Populus trichocarpa] gi|222852495|gb|EEE90042.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  112 bits (280), Expect(2) = 5e-31
 Identities = 53/95 (55%), Positives = 63/95 (66%)
 Frame = +1

Query: 190 QLQEFLAEKRKWNPCEERMLMAWNTGELPLHAGVLPPFLYGKGFHNQWVINEALSSDFRF 369
           +LQE L    +WN CE+RMLMAWN   LPLH GVLPPFLYGKG HN WV+NEA+SS+ R 
Sbjct: 75  ELQEILGHHWEWNHCEDRMLMAWNNRNLPLHNGVLPPFLYGKGIHNHWVVNEAVSSELRL 134

Query: 370 LFDASGAISSFYPNKLGNWSNQIPRDSGSADTKNR 474
           +FDAS  IS    N   +WS    R S   + +NR
Sbjct: 135 VFDASWTISCLSLNYPEHWSELSVRGSSVLEIENR 169



 Score = 47.0 bits (110), Expect(2) = 5e-31
 Identities = 16/37 (43%), Positives = 30/37 (81%)
 Frame = +2

Query: 2   WLLIATSPEVLHFPFYLDEAAQHWVKEDGVQIKLKKV 112
           WLL+A+   V +FPF+LD+A +HW++EDG +++ +++
Sbjct: 40  WLLVASLRNVSYFPFHLDDAGEHWLREDGQRVRRQEL 76


>emb|CAN65937.1| hypothetical protein VITISV_008966 [Vitis vinifera]
          Length = 546

 Score =  112 bits (281), Expect(2) = 1e-30
 Identities = 53/86 (61%), Positives = 61/86 (70%)
 Frame = +1

Query: 220 KWNPCEERMLMAWNTGELPLHAGVLPPFLYGKGFHNQWVINEALSSDFRFLFDASGAISS 399
           +WN  E RMLMAWN   LPLH GVLPPFLYGKG HN WVINEALSS+ RF+FDAS  I+S
Sbjct: 78  QWNCHEGRMLMAWNNRGLPLHTGVLPPFLYGKGLHNHWVINEALSSELRFIFDASWTITS 137

Query: 400 FYPNKLGNWSNQIPRDSGSADTKNRS 477
           FY   L  WS+++       + KNRS
Sbjct: 138 FYLKDLDQWSDRLVEGYNFXNIKNRS 163



 Score = 45.1 bits (105), Expect(2) = 1e-30
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = +2

Query: 2   WLLIATSPEVLHFPFYLDEAAQHWVKEDGVQIKLKK 109
           WLL A    V +FPF LDEA +HW+++DG +I+ +K
Sbjct: 40  WLLFAHLRSVFYFPFRLDEAGKHWLRKDGKRIRTQK 75


>ref|XP_002527929.1| conserved hypothetical protein [Ricinus communis]
           gi|223532704|gb|EEF34486.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 498

 Score =  115 bits (289), Expect(2) = 6e-30
 Identities = 54/94 (57%), Positives = 65/94 (69%)
 Frame = +1

Query: 196 QEFLAEKRKWNPCEERMLMAWNTGELPLHAGVLPPFLYGKGFHNQWVINEALSSDFRFLF 375
           +E L +   WN C++RMLMAWN+  + LH GVLPPFLYGKG HN WVINEA+ S+FRF+F
Sbjct: 152 EEMLGQNWLWNHCDDRMLMAWNSKNIALHKGVLPPFLYGKGTHNYWVINEAVLSEFRFVF 211

Query: 376 DASGAISSFYPNKLGNWSNQIPRDSGSADTKNRS 477
           DAS  ISSFY +   NW N   + S   DT  RS
Sbjct: 212 DASWTISSFYLDDDVNWLNHSVKGSDFVDTSTRS 245



 Score = 40.0 bits (92), Expect(2) = 6e-30
 Identities = 13/29 (44%), Positives = 23/29 (79%)
 Frame = +2

Query: 2   WLLIATSPEVLHFPFYLDEAAQHWVKEDG 88
           WLL+A+   + + PF+LD++ +HW++EDG
Sbjct: 117 WLLVASLHNLSYLPFHLDDSGRHWLREDG 145


>ref|XP_002271910.2| PREDICTED: uncharacterized protein LOC100242526 [Vitis vinifera]
          Length = 874

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/96 (60%), Positives = 70/96 (72%)
 Frame = +1

Query: 190 QLQEFLAEKRKWNPCEERMLMAWNTGELPLHAGVLPPFLYGKGFHNQWVINEALSSDFRF 369
           ++QEFLA+  +WN  E RMLMAWN   LPLH GVLPPFLYGKG HN WVINEALSS+ RF
Sbjct: 234 KMQEFLAQSWQWNCHEGRMLMAWNNRGLPLHTGVLPPFLYGKGLHNHWVINEALSSELRF 293

Query: 370 LFDASGAISSFYPNKLGNWSNQIPRDSGSADTKNRS 477
           +FDAS  I+SFY   L  WS+++      ++ KNRS
Sbjct: 294 IFDASWTITSFYLKDLDQWSDRLVEGYNFSNIKNRS 329


>emb|CBI18645.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/83 (65%), Positives = 64/83 (77%)
 Frame = +1

Query: 190 QLQEFLAEKRKWNPCEERMLMAWNTGELPLHAGVLPPFLYGKGFHNQWVINEALSSDFRF 369
           ++QEFLA+  +WN  E RMLMAWN   LPLH GVLPPFLYGKG HN WVINEALSS+ RF
Sbjct: 188 KMQEFLAQSWQWNCHEGRMLMAWNNRGLPLHTGVLPPFLYGKGLHNHWVINEALSSELRF 247

Query: 370 LFDASGAISSFYPNKLGNWSNQI 438
           +FDAS  I+SFY   L  WS+++
Sbjct: 248 IFDASWTITSFYLKDLDQWSDRL 270


Top