BLASTX nr result

ID: Cimicifuga21_contig00028973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028973
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174469.1| phosphoribosyl-ATP pyrophosphatase [Arabidopsis...    90   2e-16
ref|XP_002893693.1| AT-IE [Arabidopsis lyrata subsp. lyrata] gi|...    90   2e-16
ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycin...    89   5e-16
ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunction...    87   1e-15
gb|AFW79537.1| histidine biosynthesis protein hisIE [Zea mays]         87   1e-15

>ref|NP_174469.1| phosphoribosyl-ATP pyrophosphatase [Arabidopsis thaliana]
           gi|11132859|sp|O82768.1|HIS2_ARATH RecName:
           Full=Histidine biosynthesis bifunctional protein hisIE,
           chloroplastic; Includes: RecName:
           Full=Phosphoribosyl-AMP cyclohydrolase; Short=PRA-CH;
           Includes: RecName: Full=Phosphoribosyl-ATP
           pyrophosphatase; Short=PRA-PH; Flags: Precursor
           gi|12321304|gb|AAG50725.1|AC079041_18 phosphoribosyl-ATP
           pyrophosphohydrolase (At-IE) [Arabidopsis thaliana]
           gi|3461884|dbj|BAA32528.1| phosphoribosyl-ATP
           pyrophosphohydrolase [Arabidopsis thaliana]
           gi|3461886|dbj|BAA32529.1| phosphoribosyl-ATP
           pyrophosphohydrolase [Arabidopsis thaliana]
           gi|15028395|gb|AAK76674.1| putative phosphoribosyl-ATP
           pyrophosphohydrolase At-IE [Arabidopsis thaliana]
           gi|19310753|gb|AAL85107.1| putative phosphoribosyl-ATP
           pyrophosphohydrolase At-IE [Arabidopsis thaliana]
           gi|21554409|gb|AAM63514.1| phosphoribosyl-ATP
           pyrophosphohydrolase At-IE [Arabidopsis thaliana]
           gi|332193287|gb|AEE31408.1| phosphoribosyl-ATP
           pyrophosphatase [Arabidopsis thaliana]
          Length = 281

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = +3

Query: 234 QVDRLLDGVKWDDKGLAVAIAQHVDTGAILMQGFANREALATTISSRKATF 386
           +VD LLD +KWDDKGLAVAIAQ+VDTGA+LMQGF NREAL+TTISSRKATF
Sbjct: 51  KVDNLLDRIKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATF 101


>ref|XP_002893693.1| AT-IE [Arabidopsis lyrata subsp. lyrata]
           gi|297339535|gb|EFH69952.1| AT-IE [Arabidopsis lyrata
           subsp. lyrata]
          Length = 281

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = +3

Query: 234 QVDRLLDGVKWDDKGLAVAIAQHVDTGAILMQGFANREALATTISSRKATF 386
           +VD LLD +KWDDKGLAVAIAQ+VDTGA+LMQGF NREAL+TTISSRKATF
Sbjct: 51  KVDNLLDRIKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATF 101


>ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycine max]
           gi|255641260|gb|ACU20907.1| unknown [Glycine max]
          Length = 281

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +3

Query: 234 QVDRLLDGVKWDDKGLAVAIAQHVDTGAILMQGFANREALATTISSRKATF 386
           +VD LLD VKWD KGL VAIAQ+VDTGAILMQGFANREA+ATTISSRKATF
Sbjct: 46  KVDSLLDSVKWDTKGLVVAIAQNVDTGAILMQGFANREAIATTISSRKATF 96


>ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE,
           chloroplastic [Vitis vinifera]
           gi|296082253|emb|CBI21258.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/51 (82%), Positives = 48/51 (94%)
 Frame = +3

Query: 234 QVDRLLDGVKWDDKGLAVAIAQHVDTGAILMQGFANREALATTISSRKATF 386
           +V+ LLD VKWDDKGLAVAIAQ+VDTGA+LMQGF NR+ALATTISS+KATF
Sbjct: 56  KVETLLDSVKWDDKGLAVAIAQNVDTGAVLMQGFVNRDALATTISSQKATF 106


>gb|AFW79537.1| histidine biosynthesis protein hisIE [Zea mays]
          Length = 299

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = +3

Query: 234 QVDRLLDGVKWDDKGLAVAIAQHVDTGAILMQGFANREALATTISSRKATF 386
           +VD LLD VKWD KGLAVAIAQ+VDTGAILMQGFAN+EALA TIS+RKATF
Sbjct: 68  EVDTLLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATF 118


Top