BLASTX nr result

ID: Cimicifuga21_contig00028971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028971
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528385.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|NP_194814.2| heptahelical transmembrane protein2 [Arabidopsi...    77   1e-12
gb|AAL67024.1| unknown protein [Arabidopsis thaliana]                  77   1e-12
ref|XP_002867326.1| hypothetical protein ARALYDRAFT_491666 [Arab...    76   2e-12
ref|XP_002324517.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>ref|XP_002528385.1| conserved hypothetical protein [Ricinus communis]
           gi|223532173|gb|EEF33978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/81 (48%), Positives = 45/81 (55%)
 Frame = -1

Query: 245 NLGLLVMQNNSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXX 66
           N G      + +N +  D  + H  Q S+F M      E IPRWP FVFL GAMGC    
Sbjct: 27  NKGFEDFNVSDNNHMFPDSHLRHISQQSLFQMHNQDGSEAIPRWPWFVFLSGAMGCLICS 86

Query: 65  XXXXXLACHSRRFNLFFWRLD 3
                LACHS+RFNLFFWRLD
Sbjct: 87  SISHLLACHSKRFNLFFWRLD 107


>ref|NP_194814.2| heptahelical transmembrane protein2 [Arabidopsis thaliana]
           gi|42573093|ref|NP_974643.1| heptahelical transmembrane
           protein2 [Arabidopsis thaliana]
           gi|30385618|gb|AAP23168.1| HHP2 [Arabidopsis thaliana]
           gi|60543323|gb|AAX22259.1| At4g30850 [Arabidopsis
           thaliana] gi|94442447|gb|ABF19011.1| At4g30850
           [Arabidopsis thaliana] gi|332660419|gb|AEE85819.1|
           heptahelical transmembrane protein2 [Arabidopsis
           thaliana] gi|332660420|gb|AEE85820.1| heptahelical
           transmembrane protein2 [Arabidopsis thaliana]
          Length = 358

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/72 (51%), Positives = 45/72 (62%)
 Frame = -1

Query: 218 NSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXXXXLACH 39
           +S   L  DL +TH +  S+ + +GD + E IP+WP  VFL GAMGC          ACH
Sbjct: 128 SSDQTLHHDLNVTHTR--SLLNSQGDVNYEAIPKWPWLVFLTGAMGCLICSSMSHLFACH 185

Query: 38  SRRFNLFFWRLD 3
           SRRFNLFFWRLD
Sbjct: 186 SRRFNLFFWRLD 197


>gb|AAL67024.1| unknown protein [Arabidopsis thaliana]
          Length = 358

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/72 (51%), Positives = 45/72 (62%)
 Frame = -1

Query: 218 NSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXXXXLACH 39
           +S   L  DL +TH +  S+ + +GD + E IP+WP  VFL GAMGC          ACH
Sbjct: 128 SSDQTLHHDLNVTHTR--SLLNSQGDVNYEAIPKWPWLVFLTGAMGCLICSSMSHLFACH 185

Query: 38  SRRFNLFFWRLD 3
           SRRFNLFFWRLD
Sbjct: 186 SRRFNLFFWRLD 197


>ref|XP_002867326.1| hypothetical protein ARALYDRAFT_491666 [Arabidopsis lyrata subsp.
           lyrata] gi|297313162|gb|EFH43585.1| hypothetical protein
           ARALYDRAFT_491666 [Arabidopsis lyrata subsp. lyrata]
          Length = 360

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/72 (50%), Positives = 45/72 (62%)
 Frame = -1

Query: 218 NSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXXXXLACH 39
           +S   L  DL +TH +  S+ + +GD + E +P+WP  VFL GAMGC          ACH
Sbjct: 130 SSDQTLHHDLNVTHTR--SLLNSQGDVNYEAVPKWPWLVFLSGAMGCLICSSMSHLFACH 187

Query: 38  SRRFNLFFWRLD 3
           SRRFNLFFWRLD
Sbjct: 188 SRRFNLFFWRLD 199


>ref|XP_002324517.1| predicted protein [Populus trichocarpa] gi|222865951|gb|EEF03082.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/78 (51%), Positives = 49/78 (62%)
 Frame = -1

Query: 236 LLVMQNNSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXX 57
           L++M+ N    L+  + M H  Q S+F  + DGS + IPRWP FVFL GAM C       
Sbjct: 109 LMMMKKNQD--LNDSVLMRHISQQSVFHKQ-DGSDKVIPRWPWFVFLSGAMMCLVCSSLS 165

Query: 56  XXLACHSRRFNLFFWRLD 3
             LACHS+RFNLFFWRLD
Sbjct: 166 HLLACHSKRFNLFFWRLD 183


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