BLASTX nr result
ID: Cimicifuga21_contig00028971
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00028971 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528385.1| conserved hypothetical protein [Ricinus comm... 79 3e-13 ref|NP_194814.2| heptahelical transmembrane protein2 [Arabidopsi... 77 1e-12 gb|AAL67024.1| unknown protein [Arabidopsis thaliana] 77 1e-12 ref|XP_002867326.1| hypothetical protein ARALYDRAFT_491666 [Arab... 76 2e-12 ref|XP_002324517.1| predicted protein [Populus trichocarpa] gi|2... 75 4e-12 >ref|XP_002528385.1| conserved hypothetical protein [Ricinus communis] gi|223532173|gb|EEF33978.1| conserved hypothetical protein [Ricinus communis] Length = 268 Score = 79.3 bits (194), Expect = 3e-13 Identities = 39/81 (48%), Positives = 45/81 (55%) Frame = -1 Query: 245 NLGLLVMQNNSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXX 66 N G + +N + D + H Q S+F M E IPRWP FVFL GAMGC Sbjct: 27 NKGFEDFNVSDNNHMFPDSHLRHISQQSLFQMHNQDGSEAIPRWPWFVFLSGAMGCLICS 86 Query: 65 XXXXXLACHSRRFNLFFWRLD 3 LACHS+RFNLFFWRLD Sbjct: 87 SISHLLACHSKRFNLFFWRLD 107 >ref|NP_194814.2| heptahelical transmembrane protein2 [Arabidopsis thaliana] gi|42573093|ref|NP_974643.1| heptahelical transmembrane protein2 [Arabidopsis thaliana] gi|30385618|gb|AAP23168.1| HHP2 [Arabidopsis thaliana] gi|60543323|gb|AAX22259.1| At4g30850 [Arabidopsis thaliana] gi|94442447|gb|ABF19011.1| At4g30850 [Arabidopsis thaliana] gi|332660419|gb|AEE85819.1| heptahelical transmembrane protein2 [Arabidopsis thaliana] gi|332660420|gb|AEE85820.1| heptahelical transmembrane protein2 [Arabidopsis thaliana] Length = 358 Score = 77.4 bits (189), Expect = 1e-12 Identities = 37/72 (51%), Positives = 45/72 (62%) Frame = -1 Query: 218 NSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXXXXLACH 39 +S L DL +TH + S+ + +GD + E IP+WP VFL GAMGC ACH Sbjct: 128 SSDQTLHHDLNVTHTR--SLLNSQGDVNYEAIPKWPWLVFLTGAMGCLICSSMSHLFACH 185 Query: 38 SRRFNLFFWRLD 3 SRRFNLFFWRLD Sbjct: 186 SRRFNLFFWRLD 197 >gb|AAL67024.1| unknown protein [Arabidopsis thaliana] Length = 358 Score = 77.4 bits (189), Expect = 1e-12 Identities = 37/72 (51%), Positives = 45/72 (62%) Frame = -1 Query: 218 NSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXXXXLACH 39 +S L DL +TH + S+ + +GD + E IP+WP VFL GAMGC ACH Sbjct: 128 SSDQTLHHDLNVTHTR--SLLNSQGDVNYEAIPKWPWLVFLTGAMGCLICSSMSHLFACH 185 Query: 38 SRRFNLFFWRLD 3 SRRFNLFFWRLD Sbjct: 186 SRRFNLFFWRLD 197 >ref|XP_002867326.1| hypothetical protein ARALYDRAFT_491666 [Arabidopsis lyrata subsp. lyrata] gi|297313162|gb|EFH43585.1| hypothetical protein ARALYDRAFT_491666 [Arabidopsis lyrata subsp. lyrata] Length = 360 Score = 76.3 bits (186), Expect = 2e-12 Identities = 36/72 (50%), Positives = 45/72 (62%) Frame = -1 Query: 218 NSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXXXXLACH 39 +S L DL +TH + S+ + +GD + E +P+WP VFL GAMGC ACH Sbjct: 130 SSDQTLHHDLNVTHTR--SLLNSQGDVNYEAVPKWPWLVFLSGAMGCLICSSMSHLFACH 187 Query: 38 SRRFNLFFWRLD 3 SRRFNLFFWRLD Sbjct: 188 SRRFNLFFWRLD 199 >ref|XP_002324517.1| predicted protein [Populus trichocarpa] gi|222865951|gb|EEF03082.1| predicted protein [Populus trichocarpa] Length = 344 Score = 75.5 bits (184), Expect = 4e-12 Identities = 40/78 (51%), Positives = 49/78 (62%) Frame = -1 Query: 236 LLVMQNNSSNPLSQDLKMTHGQQASIFDMEGDGSKEKIPRWPCFVFLVGAMGCXXXXXXX 57 L++M+ N L+ + M H Q S+F + DGS + IPRWP FVFL GAM C Sbjct: 109 LMMMKKNQD--LNDSVLMRHISQQSVFHKQ-DGSDKVIPRWPWFVFLSGAMMCLVCSSLS 165 Query: 56 XXLACHSRRFNLFFWRLD 3 LACHS+RFNLFFWRLD Sbjct: 166 HLLACHSKRFNLFFWRLD 183