BLASTX nr result

ID: Cimicifuga21_contig00028911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028911
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276492.1| PREDICTED: AP2/ERF and B3 domain-containing ...   118   4e-25
ref|XP_004146691.1| PREDICTED: AP2/ERF and B3 domain-containing ...   109   3e-22
ref|XP_002534427.1| DNA-binding protein RAV1, putative [Ricinus ...   100   1e-19
ref|XP_002325139.1| AP2 domain-containing transcription factor [...    97   1e-18
ref|XP_002529958.1| DNA binding protein, putative [Ricinus commu...    96   4e-18

>ref|XP_002276492.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           At1g51120-like [Vitis vinifera]
          Length = 357

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/109 (55%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
 Frame = +2

Query: 74  LVFFDREMREWNFRYCYWKSSQSYVFTRGWNRFVKEKKLKANDLITFCKCEYRDEFKEHR 253
           LVF+DR MR W FRYCYW+SSQSYVFTRGWNRFVK+K+L  ND++TF  CEY    KE R
Sbjct: 216 LVFYDRLMRLWKFRYCYWRSSQSYVFTRGWNRFVKDKELNENDIVTFYLCEYGQGTKEGR 275

Query: 254 VFCMIDV-----EPSILENNNDFTGGLNSYAEKDVEL*LGLKQFVEEHK 385
            FCMIDV           NN  F  G N Y    +EL   LKQ +  +K
Sbjct: 276 TFCMIDVAYDRSTDGRDANNGSFVEGPNRYVGLQIELQQDLKQNIGYNK 324


>ref|XP_004146691.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           At1g50680-like [Cucumis sativus]
           gi|449503179|ref|XP_004161873.1| PREDICTED: AP2/ERF and
           B3 domain-containing transcription factor At1g50680-like
           [Cucumis sativus]
          Length = 339

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/105 (53%), Positives = 65/105 (61%)
 Frame = +2

Query: 74  LVFFDREMREWNFRYCYWKSSQSYVFTRGWNRFVKEKKLKANDLITFCKCEYRDEFKEHR 253
           L+FFD+ MR+W FRYCYWKSSQSYVFTRGWNRFVKEK+LKAND I F  CE         
Sbjct: 215 LLFFDKMMRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAFYLCEAAKSSDSKT 274

Query: 254 VFCMIDVEPSILENNNDFTGGLNSYAEKDVEL*LGLKQFVEEHKV 388
            FC++DV+      N D +GGL        EL L L+    E  V
Sbjct: 275 TFCVVDVK------NRDNSGGLVENETTCSELQLNLRHGEVEESV 313


>ref|XP_002534427.1| DNA-binding protein RAV1, putative [Ricinus communis]
           gi|223525312|gb|EEF27956.1| DNA-binding protein RAV1,
           putative [Ricinus communis]
          Length = 349

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/89 (53%), Positives = 60/89 (67%)
 Frame = +2

Query: 74  LVFFDREMREWNFRYCYWKSSQSYVFTRGWNRFVKEKKLKANDLITFCKCEYRDEFKEHR 253
           L F+D+ M+ W FRYCYWKSSQSYVFTRGWNRFVKEK+LKAND I  C CE R+  +   
Sbjct: 216 LAFYDKAMKLWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAICLCECRENAELTD 275

Query: 254 VFCMIDVEPSILENNNDFTGGLNSYAEKD 340
            + MIDV     +N  D +  L S ++ +
Sbjct: 276 SYYMIDV-----KNEGDSSSLLESGSQSE 299


>ref|XP_002325139.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222866573|gb|EEF03704.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 549

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = +2

Query: 74  LVFFDREMREWNFRYCYWKSSQSYVFTRGWNRFVKEKKLKANDLITFCKCEYRDEF-KEH 250
           L F+D+ M+ W FRYCYWKSSQSYVFTRGWNRFVKEKKLKAND I+F  CE  +      
Sbjct: 209 LAFYDKSMKLWKFRYCYWKSSQSYVFTRGWNRFVKEKKLKANDTISFSLCERGETVDSAA 268

Query: 251 RVFCMIDVEPSILENNNDFTGGLNSYAEKDV 343
           + F MIDV      NN + +  ++  + + +
Sbjct: 269 QTFNMIDV------NNRENSSSISELSSQSI 293


>ref|XP_002529958.1| DNA binding protein, putative [Ricinus communis]
           gi|223530556|gb|EEF32435.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 374

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/100 (50%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
 Frame = +2

Query: 74  LVFFDREMREWNFRYCYWKSSQSYVFTRGWNRFVKEKKLKANDLITFCKCEYRD-EFKEH 250
           LVF+DR M+ W FRYCYW+SSQS+VFTRGWNRFVKEK LK  D+ITF  C   D   +E 
Sbjct: 234 LVFYDRLMKCWKFRYCYWRSSQSFVFTRGWNRFVKEKNLKEKDIITFYACASPDNRVQEG 293

Query: 251 RVFCMIDVEPS----ILENNNDFTGGLNSYAEKDVEL*LG 358
           + F +ID+  S    +++ NN          +K++EL LG
Sbjct: 294 QNFSLIDISYSNGQVVVDGNNQM-----EEMQKELELRLG 328


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