BLASTX nr result

ID: Cimicifuga21_contig00028901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028901
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33287.3| unnamed protein product [Vitis vinifera]              471   e-130
ref|XP_004158043.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...   420   e-115
ref|XP_004153514.1| PREDICTED: abnormal spindle-like microcephal...   420   e-115
ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephal...   420   e-115
ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus c...   364   3e-98

>emb|CBI33287.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  471 bits (1213), Expect = e-130
 Identities = 248/438 (56%), Positives = 319/438 (72%), Gaps = 22/438 (5%)
 Frame = -1

Query: 1256 LRRSVHREKEVKNIQITTIVTLVLVWRRWR-NSIIRKRIAVTKLQSQWRAWLARRKFLHQ 1080
            LR+S  ++K+       T+  +   +R W   ++++K+ A  KLQS +R W  RR F+ +
Sbjct: 141  LRKSFVKKKQ-------TVRKIQCAFRGWLLRNLVKKQQAAIKLQSAFRGWSLRRSFVKK 193

Query: 1079 KKSIVMIQSALRSFNCWKNFQQYKIASRSATIIQSRFRGLICRKEFNRKRHLILLIQS-- 906
            +++ + IQS  R   C +NFQ YKIAS+SA +IQS  RG I RK   R RH I++IQ   
Sbjct: 194  QQAAIKIQSDFRGLKCQRNFQIYKIASKSAIVIQSHLRGWIARKAVCRLRHQIVVIQVRC 253

Query: 905  --------LW--------RGWLTRRDFVYQREAAIAIQSSYRCLKSYRKFQSSRLAAIEI 774
                     W        RGWLTRRD + QR+A I IQ++++C+K ++ FQ  R AAI+I
Sbjct: 254  SPQFLLYICWGLLIFNHCRGWLTRRDLLLQRKAVIKIQNAFQCVKCWKAFQCYRYAAIDI 313

Query: 773  QRFARGKVARNRLLGVSFYRSS---GCMGPISSGCTGSFELKIFLYSVIKLQRWWKKVLL 603
            QRF RG + RNRLLG S  RS+   GC    S GC  SF+LK+ L SV+KLQRWW+ VL 
Sbjct: 314  QRFVRGHITRNRLLGTSSLRSASPNGCTLQASRGCFPSFQLKMLLTSVLKLQRWWRGVLF 373

Query: 602  RKVETRSAITIQSHIRGWIARQEACREKHRIIVIQSYWKGYLARKESRGQLLDLRLRVQR 423
                T+SAI IQSHIRGWIAR+EA RE+HR++VIQSYWKGYLARKESRGQL+DLRLRVQ+
Sbjct: 374  LNSRTKSAIIIQSHIRGWIARREATRERHRVVVIQSYWKGYLARKESRGQLVDLRLRVQK 433

Query: 422  SCSNVDDGMRLINRLVSALSELLNIRSIRSILHTCSTLDMATTHSQRCCETLVSAGAVEK 243
            S ++VDDGMR+INRL++ALS+LL+++S+  ILHTC+TLDMAT HSQ CCE LV+AGA+  
Sbjct: 434  SATSVDDGMRIINRLLAALSDLLSMKSVSGILHTCATLDMATAHSQICCEKLVAAGAINT 493

Query: 242  LLKLICSVSRSIPDQEVLKHALSTLRNISRYSHLADVLVNTKGSIETILRVMLRNKEEGY 63
            LLKLI SVSRSIPDQEVLKHALSTLRN+S Y HLA+VL++T+GS+ETIL   LRNKEEGY
Sbjct: 494  LLKLIRSVSRSIPDQEVLKHALSTLRNLSHYPHLAEVLIDTRGSVETILWEFLRNKEEGY 553

Query: 62   FIASHLLKQLLCTKKGVD 9
            F+AS LLK++   +KGV+
Sbjct: 554  FLASELLKKICSNQKGVE 571



 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
 Frame = -1

Query: 1106 LARRKFLHQKKSI--VMIQSALRSFNCWKNFQ---QYKIASRSATIIQSRFRGLICRKEF 942
            + +  F+ Q+K +  + I++A++    W+NF     ++    +AT IQ  FRG + R+ F
Sbjct: 63   MEKSSFIFQEKEMNDLRIKAAVKIQLAWRNFSVCNSHRNEYTAATQIQCCFRGWLLRRSF 122

Query: 941  NRKRHLILLIQSLWRGWLTRRDFVYQREAAIAIQSSYRCLKSYRKFQSSRLAAIEIQRFA 762
             +K+  ++ IQS +RGWL R+ FV +++    IQ ++R     R     + AAI++Q   
Sbjct: 123  VQKKQAVINIQSHFRGWLLRKSFVKKKQTVRKIQCAFRGW-LLRNLVKKQQAAIKLQSAF 181

Query: 761  RGKVARNRLLGVSFYRSSGCMGPISSGCTGSFELKIFLYSVIKLQRWWKKVLLRKVETRS 582
            RG   R      SF +       I S   G           +K QR ++   + K+ ++S
Sbjct: 182  RGWSLRR-----SFVKKQQAAIKIQSDFRG-----------LKCQRNFQ---IYKIASKS 222

Query: 581  AITIQSHIRGWIARQEACREKHRIIVIQ 498
            AI IQSH+RGWIAR+  CR +H+I+VIQ
Sbjct: 223  AIVIQSHLRGWIARKAVCRLRHQIVVIQ 250


>ref|XP_004158043.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
            microcephaly-associated protein homolog [Cucumis sativus]
          Length = 1291

 Score =  420 bits (1080), Expect = e-115
 Identities = 215/388 (55%), Positives = 282/388 (72%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1169 RNSIIRKRIAVTKLQSQWRAWLARRKFLHQKKSIVMIQSALRSFNCWKNFQQYKIASRSA 990
            R +   + +A  ++QS +R    RRKFL  + + ++IQ  +R   C K +   K    SA
Sbjct: 847  REAFCNEHLAAIQIQSYFRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSA 906

Query: 989  TIIQSRFRGLICRKEFNRKRHLILLIQSLWRGWLTRRDFVYQREAAIAIQSSYRCLKSYR 810
             +IQS  RG I R+E +R+R LI+L+QS WR WL +++F+ QRE+ I IQ++ RC+    
Sbjct: 907  IVIQSLVRGWIARREGHRQRRLIVLVQSFWRRWLAQKEFLLQRESVIKIQTATRCMIGRI 966

Query: 809  KFQSSRLAAIEIQRFARGKVARNRLLGV-SFYRSSGCMGPISSGCTGSFELKIFLYSVIK 633
             F   R AAIEIQR  RG++ R +LLG  S  RS+   G  S      FELK+ L S++K
Sbjct: 967  AFHRQRHAAIEIQRLIRGQITRMKLLGAASELRSTFYSGNFSRSSCKMFELKLVLGSILK 1026

Query: 632  LQRWWKKVLLRKVETRSAITIQSHIRGWIARQEACREKHRIIVIQSYWKGYLARKESRGQ 453
            LQRWWK VLL ++ +RS I IQSHIRGWI+R+ A  E+ +I++IQS+WKGYLARK S+GQ
Sbjct: 1027 LQRWWKGVLLLRLRSRSIIVIQSHIRGWISRRRAATERQQIVLIQSHWKGYLARKRSKGQ 1086

Query: 452  LLDLRLRVQRSCSNVDDGMRLINRLVSALSELLNIRSIRSILHTCSTLDMATTHSQRCCE 273
            L DLRLRVQ S +NVDDG R+INRLV ALSELL++RS+R ILHTC+TLDMAT HSQ+CCE
Sbjct: 1087 LRDLRLRVQNSAANVDDGKRIINRLVVALSELLSMRSVRGILHTCATLDMATGHSQKCCE 1146

Query: 272  TLVSAGAVEKLLKLICSVSRSIPDQEVLKHALSTLRNISRYSHLADVLVNTKGSIETILR 93
            TLV AGA+  LLKLI SVSRSIPDQEVLKHALSTLRN+SRY HL +VL++T GS+E +L 
Sbjct: 1147 TLVGAGAISTLLKLIRSVSRSIPDQEVLKHALSTLRNLSRYPHLIEVLIDTHGSVEILLW 1206

Query: 92   VMLRNKEEGYFIASHLLKQLLCTKKGVD 9
             +LRNK++G+FIAS +LK +   +KG++
Sbjct: 1207 ELLRNKDDGFFIASEVLKMICRNEKGIE 1234


>ref|XP_004153514.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
            homolog, partial [Cucumis sativus]
          Length = 731

 Score =  420 bits (1080), Expect = e-115
 Identities = 215/388 (55%), Positives = 282/388 (72%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1169 RNSIIRKRIAVTKLQSQWRAWLARRKFLHQKKSIVMIQSALRSFNCWKNFQQYKIASRSA 990
            R +   + +A  ++QS +R    RRKFL  + + ++IQ  +R   C K +   K    SA
Sbjct: 287  REAFCNEHLAAIQIQSYFRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSA 346

Query: 989  TIIQSRFRGLICRKEFNRKRHLILLIQSLWRGWLTRRDFVYQREAAIAIQSSYRCLKSYR 810
             +IQS  RG I R+E +R+R LI+L+QS WR WL +++F+ QRE+ I IQ++ RC+    
Sbjct: 347  IVIQSLVRGWIARREGHRQRRLIVLVQSFWRRWLAQKEFLLQRESVIKIQTATRCMIGRI 406

Query: 809  KFQSSRLAAIEIQRFARGKVARNRLLGV-SFYRSSGCMGPISSGCTGSFELKIFLYSVIK 633
             F   R AAIEIQR  RG++ R +LLG  S  RS+   G  S      FELK+ L S++K
Sbjct: 407  AFHRQRHAAIEIQRLIRGQITRMKLLGAASELRSTFYSGNFSRSSCKMFELKLVLGSILK 466

Query: 632  LQRWWKKVLLRKVETRSAITIQSHIRGWIARQEACREKHRIIVIQSYWKGYLARKESRGQ 453
            LQRWWK VLL ++ +RS I IQSHIRGWI+R+ A  E+ +I++IQS+WKGYLARK S+GQ
Sbjct: 467  LQRWWKGVLLLRLRSRSIIVIQSHIRGWISRRRAATERQQIVLIQSHWKGYLARKRSKGQ 526

Query: 452  LLDLRLRVQRSCSNVDDGMRLINRLVSALSELLNIRSIRSILHTCSTLDMATTHSQRCCE 273
            L DLRLRVQ S +NVDDG R+INRLV ALSELL++RS+R ILHTC+TLDMAT HSQ+CCE
Sbjct: 527  LRDLRLRVQNSAANVDDGKRIINRLVVALSELLSMRSVRGILHTCATLDMATGHSQKCCE 586

Query: 272  TLVSAGAVEKLLKLICSVSRSIPDQEVLKHALSTLRNISRYSHLADVLVNTKGSIETILR 93
            TLV AGA+  LLKLI SVSRSIPDQEVLKHALSTLRN+SRY HL +VL++T GS+E +L 
Sbjct: 587  TLVGAGAISTLLKLIRSVSRSIPDQEVLKHALSTLRNLSRYPHLIEVLIDTHGSVEILLW 646

Query: 92   VMLRNKEEGYFIASHLLKQLLCTKKGVD 9
             +LRNK++G+FIAS +LK +   +KG++
Sbjct: 647  ELLRNKDDGFFIASEVLKMICRNEKGIE 674


>ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
            homolog [Cucumis sativus]
          Length = 1368

 Score =  420 bits (1080), Expect = e-115
 Identities = 215/388 (55%), Positives = 282/388 (72%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1169 RNSIIRKRIAVTKLQSQWRAWLARRKFLHQKKSIVMIQSALRSFNCWKNFQQYKIASRSA 990
            R +   + +A  ++QS +R    RRKFL  + + ++IQ  +R   C K +   K    SA
Sbjct: 924  REAFCNEHLAAIQIQSYFRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSA 983

Query: 989  TIIQSRFRGLICRKEFNRKRHLILLIQSLWRGWLTRRDFVYQREAAIAIQSSYRCLKSYR 810
             +IQS  RG I R+E +R+R LI+L+QS WR WL +++F+ QRE+ I IQ++ RC+    
Sbjct: 984  IVIQSLVRGWIARREGHRQRRLIVLVQSFWRRWLAQKEFLLQRESVIKIQTATRCMIGRI 1043

Query: 809  KFQSSRLAAIEIQRFARGKVARNRLLGV-SFYRSSGCMGPISSGCTGSFELKIFLYSVIK 633
             F   R AAIEIQR  RG++ R +LLG  S  RS+   G  S      FELK+ L S++K
Sbjct: 1044 AFHRQRHAAIEIQRLIRGQITRMKLLGAASELRSTFYSGNFSRSSCKMFELKLVLGSILK 1103

Query: 632  LQRWWKKVLLRKVETRSAITIQSHIRGWIARQEACREKHRIIVIQSYWKGYLARKESRGQ 453
            LQRWWK VLL ++ +RS I IQSHIRGWI+R+ A  E+ +I++IQS+WKGYLARK S+GQ
Sbjct: 1104 LQRWWKGVLLLRLRSRSIIVIQSHIRGWISRRRAATERQQIVLIQSHWKGYLARKRSKGQ 1163

Query: 452  LLDLRLRVQRSCSNVDDGMRLINRLVSALSELLNIRSIRSILHTCSTLDMATTHSQRCCE 273
            L DLRLRVQ S +NVDDG R+INRLV ALSELL++RS+R ILHTC+TLDMAT HSQ+CCE
Sbjct: 1164 LRDLRLRVQNSAANVDDGKRIINRLVVALSELLSMRSVRGILHTCATLDMATGHSQKCCE 1223

Query: 272  TLVSAGAVEKLLKLICSVSRSIPDQEVLKHALSTLRNISRYSHLADVLVNTKGSIETILR 93
            TLV AGA+  LLKLI SVSRSIPDQEVLKHALSTLRN+SRY HL +VL++T GS+E +L 
Sbjct: 1224 TLVGAGAISTLLKLIRSVSRSIPDQEVLKHALSTLRNLSRYPHLIEVLIDTHGSVEILLW 1283

Query: 92   VMLRNKEEGYFIASHLLKQLLCTKKGVD 9
             +LRNK++G+FIAS +LK +   +KG++
Sbjct: 1284 ELLRNKDDGFFIASEVLKMICRNEKGIE 1311


>ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus communis]
            gi|223542347|gb|EEF43889.1| hypothetical protein
            RCOM_0905210 [Ricinus communis]
          Length = 1282

 Score =  364 bits (934), Expect = 3e-98
 Identities = 201/424 (47%), Positives = 279/424 (65%), Gaps = 6/424 (1%)
 Frame = -1

Query: 1268 MVSQLRRSVHREKEVKNIQITTIVTLVLVWRRWRNSIIRKRIAVTKLQSQWRAWLARRKF 1089
            M+ +++ +  R  ++  +++ +  T++  + R R  I R +  V ++ +        R  
Sbjct: 811  MMQRIQAASIRNHDMSTMELVSAATIIQKYFRVR--ITRSKCKVIQMMNAPHMCQMHRSN 868

Query: 1088 LHQKKSIVMIQSALRSFNCWKNFQQYKIASR---SATIIQSRFRGLICRKEFNRKRHLIL 918
            L +       ++A+R    WKN+   +       +A  IQ  F+    RK+F +++  I 
Sbjct: 869  LER-------EAAIRIQLSWKNYIDGRCLRNQHLAAIKIQHHFQCWQLRKKFLKQKEFIT 921

Query: 917  LIQSLWRGWLTRRDFVYQREAAIAIQSSYRCLKSYRKFQSSRLAAIEIQRFARGKVARNR 738
             +Q   RGWL RR+F++Q EA   IQ+  R L   + F   + AAIEIQRF RG++AR R
Sbjct: 922  KVQRCCRGWLIRRNFMHQIEAVKKIQNVIRGLNCQKAFNCRKNAAIEIQRFVRGQIARKR 981

Query: 737  LLGVSFYR---SSGCMGPISSGCTGSFELKIFLYSVIKLQRWWKKVLLRKVETRSAITIQ 567
            LLG S +    +  C    +SGC    ELK+ L +++KLQRWW+ VLL K+ TRSAI IQ
Sbjct: 982  LLGASHFNICTTVYCKFQ-TSGCFPRPELKVILSAILKLQRWWRCVLLHKLRTRSAIVIQ 1040

Query: 566  SHIRGWIARQEACREKHRIIVIQSYWKGYLARKESRGQLLDLRLRVQRSCSNVDDGMRLI 387
            S+ RGW++RQ+   E+   ++IQS+WKGYL RKESRGQLLDLRLRVQ+S  N+DD MR+I
Sbjct: 1041 SYFRGWVSRQKVYTERRYAVMIQSHWKGYLVRKESRGQLLDLRLRVQKSAKNIDDSMRII 1100

Query: 386  NRLVSALSELLNIRSIRSILHTCSTLDMATTHSQRCCETLVSAGAVEKLLKLICSVSRSI 207
            NRL  ALSELL+++SI  ILHTC+TLDM T HSQ+CCE LV+AGA+  LLKLI  VSRSI
Sbjct: 1101 NRLKVALSELLSMKSISGILHTCATLDMTTQHSQKCCEELVAAGAIGILLKLIRLVSRSI 1160

Query: 206  PDQEVLKHALSTLRNISRYSHLADVLVNTKGSIETILRVMLRNKEEGYFIASHLLKQLLC 27
            PDQE+LKHALST+RN++RY HL +VL+++ GSIE I    LRNKE+GYFIAS +LK++  
Sbjct: 1161 PDQEILKHALSTIRNLTRYQHLTEVLIDSHGSIEIIFWEFLRNKEDGYFIASEILKKICS 1220

Query: 26   TKKG 15
             KKG
Sbjct: 1221 NKKG 1224


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