BLASTX nr result

ID: Cimicifuga21_contig00028866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028866
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270027.1| PREDICTED: uncharacterized protein LOC100254...    92   6e-17
ref|XP_002314339.1| predicted protein [Populus trichocarpa] gi|1...    89   9e-16
ref|XP_003546535.1| PREDICTED: uncharacterized protein LOC100779...    88   1e-15
ref|XP_002519346.1| conserved hypothetical protein [Ricinus comm...    86   8e-15
ref|XP_003533810.1| PREDICTED: uncharacterized protein LOC100500...    84   3e-14

>ref|XP_002270027.1| PREDICTED: uncharacterized protein LOC100254553 [Vitis vinifera]
           gi|297736831|emb|CBI26032.3| unnamed protein product
           [Vitis vinifera]
          Length = 70

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 49/77 (63%), Positives = 55/77 (71%)
 Frame = +1

Query: 124 MGSWVRSITSPFRKARTFFNQNHTRDNKSQQGHDNRDMDSQDNRVLQGEVMACAYEDVQV 303
           M SWV++ITSPFRKA TFFNQ   RD KSQ+ H+N   D      L  EVMACAYEDVQV
Sbjct: 1   MASWVKTITSPFRKACTFFNQQ-PRDKKSQKVHENPGSD------LHEEVMACAYEDVQV 53

Query: 304 MWSILDNSKPKLCKISS 354
           MWSILD SK + C I+S
Sbjct: 54  MWSILDKSKTRACNITS 70


>ref|XP_002314339.1| predicted protein [Populus trichocarpa] gi|118488665|gb|ABK96144.1|
           unknown [Populus trichocarpa]
           gi|222863379|gb|EEF00510.1| predicted protein [Populus
           trichocarpa]
          Length = 74

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
 Frame = +1

Query: 124 MGSWVRSITSPFRKARTFFNQNH--TRDNKSQQGHDNRDMDSQDNRVLQGEVMACAYEDV 297
           M SW ++ITSPFRKA TFFNQ    +RD KSQ G + R +D      L GEVMAC YEDV
Sbjct: 1   MASWKKTITSPFRKACTFFNQQQAVSRDKKSQPGEEKRVLD------LHGEVMACGYEDV 54

Query: 298 QVMWSILDNSKPKLCKISS 354
           QVMWSILD SK   C +++
Sbjct: 55  QVMWSILDKSKSATCDMTT 73


>ref|XP_003546535.1| PREDICTED: uncharacterized protein LOC100779101 [Glycine max]
          Length = 74

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/79 (59%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +1

Query: 124 MGSWVRSITSPFRKARTFFNQNHTRD--NKSQQGHDNRDMDSQDNRVLQGEVMACAYEDV 297
           M SW ++I +PF+KA TFFNQ   RD  NKSQ   +NR MD      L GEVMAC YEDV
Sbjct: 1   MASWKKTIATPFKKACTFFNQQPPRDHKNKSQTEQENRIMD------LHGEVMACGYEDV 54

Query: 298 QVMWSILDNSKPKLCKISS 354
           QVMWSILD SK   C I+S
Sbjct: 55  QVMWSILDKSKSTACNITS 73


>ref|XP_002519346.1| conserved hypothetical protein [Ricinus communis]
           gi|223541661|gb|EEF43210.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 75

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 50/80 (62%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = +1

Query: 124 MGSWVRSITSPFRKARTFFN-QNHTRD-NKSQ-QGHDNRDMDSQDNRVLQGEVMACAYED 294
           M SW ++ITSPF+KA TFFN Q  TRD NKSQ  G++NR MD      L GEVMAC YED
Sbjct: 1   MTSWKKTITSPFKKACTFFNHQQPTRDHNKSQLPGNENRAMD------LHGEVMACGYED 54

Query: 295 VQVMWSILDNSKPKLCKISS 354
           VQVMWSILD SK   C  +S
Sbjct: 55  VQVMWSILDKSKSTNCNFTS 74


>ref|XP_003533810.1| PREDICTED: uncharacterized protein LOC100500568 [Glycine max]
           gi|255630647|gb|ACU15683.1| unknown [Glycine max]
          Length = 75

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/80 (58%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = +1

Query: 124 MGSWVRSITSPFRKARTFFNQNHTRD--NKSQQGHD-NRDMDSQDNRVLQGEVMACAYED 294
           M SW ++I +PF+KA TFFNQ   RD  NKSQ     NR MD      L GEVMAC YED
Sbjct: 1   MASWKKTIATPFKKACTFFNQQPPRDHKNKSQTAEQQNRIMD------LHGEVMACGYED 54

Query: 295 VQVMWSILDNSKPKLCKISS 354
           VQVMWSILD SK   C I+S
Sbjct: 55  VQVMWSILDKSKSTACNITS 74


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