BLASTX nr result

ID: Cimicifuga21_contig00028843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028843
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37642.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260...    71   1e-10
ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
gb|ACN40217.1| unknown [Picea sitchensis]                              60   3e-07

>emb|CBI37642.3| unnamed protein product [Vitis vinifera]
          Length = 763

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -1

Query: 159 MGGLLHLFDFNQFSTSRKSLSSKKH-DGLEAPRNSFELPIEPIQSYDVVGENIP 1
           MGGL HLFDFNQ S +RK L+ K+H  GLEAPRNS ELPIE  Q Y  VG+++P
Sbjct: 1   MGGLFHLFDFNQSSMARKVLAHKRHVGGLEAPRNSLELPIETSQGYYAVGDSVP 54


>ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260782 [Vitis vinifera]
          Length = 872

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -1

Query: 159 MGGLLHLFDFNQFSTSRKSLSSKKH-DGLEAPRNSFELPIEPIQSYDVVGENIP 1
           MGGL HLFDFNQ S +RK L+ K+H  GLEAPRNS ELPIE  Q Y  VG+++P
Sbjct: 1   MGGLFHLFDFNQSSMARKVLAHKRHVGGLEAPRNSLELPIETSQGYYAVGDSVP 54


>ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|222855880|gb|EEE93427.1|
           predicted protein [Populus trichocarpa]
          Length = 898

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -1

Query: 159 MGGLLHLFDFNQFSTSRKSLSSKKH-DGLEAPRNSFELPIEPIQS 28
           MGG LHLFDFNQ S +RK L+ K+H DGLEAPRNS EL +E  QS
Sbjct: 1   MGGFLHLFDFNQDSMARKILAHKRHVDGLEAPRNSLELQVESSQS 45


>gb|ACN40217.1| unknown [Picea sitchensis]
          Length = 894

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = -1

Query: 159 MGGLLHLFDFNQFSTSRKSLSSKKH-DGLEAPRNSFELPIEPIQSYDVVGENIP 1
           MGGLL+LFDFNQ    R+ L+ K+H DGLEAPRNS ++ +E   S +V  E+IP
Sbjct: 21  MGGLLNLFDFNQAHNGRRLLTEKRHGDGLEAPRNSLDVSLETPPSREVKNEDIP 74


Top