BLASTX nr result

ID: Cimicifuga21_contig00028804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028804
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15...   199   2e-49
ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
gb|ABK92865.1| unknown [Populus trichocarpa]                          182   2e-44
gb|ABK93072.1| unknown [Populus trichocarpa]                          181   7e-44
ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [C...   163   2e-38

>ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15c [Vitis vinifera]
           gi|297737975|emb|CBI27176.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  199 bits (505), Expect = 2e-49
 Identities = 93/131 (70%), Positives = 105/131 (80%)
 Frame = +3

Query: 72  DSVVDLTDKIHQLPCCIKYNGPCSVSDYFKPKNAGAEVEGLSVEEACFRGRKLQGTKIHL 251
           ++VVDLT  IHQLPCCIKYNGPCSVS YFKPK+ G EVEGL VEEA FRGRKLQGT IHL
Sbjct: 23  EAVVDLTGHIHQLPCCIKYNGPCSVSHYFKPKHTGIEVEGLKVEEAFFRGRKLQGTTIHL 82

Query: 252 PDGYSGFVLGKNKGSGKRKATGISEENLNQWEMRAKFQNINYWNHDDLPSHSDAILRCVH 431
           P+GYSGFVLGK K S   K+TG SE N+N+WE  AKFQ I +WNHD+LPS  D+ +R  H
Sbjct: 83  PEGYSGFVLGK-KSSNTTKSTGTSEGNMNRWETNAKFQAITFWNHDNLPSQDDSYVRSFH 141

Query: 432 WLPVANALHKP 464
           WL V+ ALHKP
Sbjct: 142 WLAVSKALHKP 152


>ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/134 (63%), Positives = 103/134 (76%)
 Frame = +3

Query: 63  QSDDSVVDLTDKIHQLPCCIKYNGPCSVSDYFKPKNAGAEVEGLSVEEACFRGRKLQGTK 242
           +S+  V +LT K+H LPCCIKY+GP +VS YFKPK  G EVE + VEEA FRGRKLQG  
Sbjct: 19  KSETEVPNLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKVEEAHFRGRKLQGAT 78

Query: 243 IHLPDGYSGFVLGKNKGSGKRKATGISEENLNQWEMRAKFQNINYWNHDDLPSHSDAILR 422
           + +P+GYSGFV+GK K  GKRKA+ +SE+N N WE+ AKF+NI YWNHD LPS  DA +R
Sbjct: 79  LAIPNGYSGFVIGK-KSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVR 137

Query: 423 CVHWLPVANALHKP 464
            +HWL VA ALHKP
Sbjct: 138 SLHWLSVAEALHKP 151


>gb|ABK92865.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/134 (63%), Positives = 103/134 (76%)
 Frame = +3

Query: 63  QSDDSVVDLTDKIHQLPCCIKYNGPCSVSDYFKPKNAGAEVEGLSVEEACFRGRKLQGTK 242
           +S+  V +LT K+H LPCCIKY+GP +VS YFKPK  G EVE + VEEA FRGRKLQG  
Sbjct: 19  KSETEVPNLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKVEEAHFRGRKLQGAT 78

Query: 243 IHLPDGYSGFVLGKNKGSGKRKATGISEENLNQWEMRAKFQNINYWNHDDLPSHSDAILR 422
           + +P+GYSGFV+GK K  GKRKA+ +SE+N N WE+ AKF+NI YWNHD LPS  DA +R
Sbjct: 79  LPIPNGYSGFVIGK-KSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVR 137

Query: 423 CVHWLPVANALHKP 464
            +HWL VA ALHKP
Sbjct: 138 SLHWLSVAEALHKP 151


>gb|ABK93072.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/134 (62%), Positives = 103/134 (76%)
 Frame = +3

Query: 63  QSDDSVVDLTDKIHQLPCCIKYNGPCSVSDYFKPKNAGAEVEGLSVEEACFRGRKLQGTK 242
           +S+  V +LT K+H LPCCIKY+GP +VS YFKPK  G EVE + VEEA FRGRKLQG  
Sbjct: 19  KSETEVPNLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKVEEAHFRGRKLQGAT 78

Query: 243 IHLPDGYSGFVLGKNKGSGKRKATGISEENLNQWEMRAKFQNINYWNHDDLPSHSDAILR 422
           + +P+GYSGFV+GK K  GKRK++ +SE+N N WE+ AKF+NI YWNHD LPS  DA +R
Sbjct: 79  LAIPNGYSGFVIGK-KSLGKRKSSDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVR 137

Query: 423 CVHWLPVANALHKP 464
            +HWL VA ALHKP
Sbjct: 138 SLHWLSVAEALHKP 151


>ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 164

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/133 (55%), Positives = 94/133 (70%)
 Frame = +3

Query: 66  SDDSVVDLTDKIHQLPCCIKYNGPCSVSDYFKPKNAGAEVEGLSVEEACFRGRKLQGTKI 245
           +D   +D++ K+HQLPC IK++GPC VS YFKPK+ G EV+GL++EEA FRGRKLQG  I
Sbjct: 21  TDPKALDISGKVHQLPCTIKFDGPCPVSHYFKPKSTGIEVDGLNLEEAYFRGRKLQGATI 80

Query: 246 HLPDGYSGFVLGKNKGSGKRKATGISEENLNQWEMRAKFQNINYWNHDDLPSHSDAILRC 425
            LP+GYSG+VLGK   + K        ++ + W+++AKF NI YWNHD LPS  D   R 
Sbjct: 81  SLPEGYSGYVLGKKSKASKHC------DDSSPWQVKAKFDNITYWNHDTLPSQDDTFQRT 134

Query: 426 VHWLPVANALHKP 464
            HWL VA ALHKP
Sbjct: 135 FHWLTVAQALHKP 147


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